RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 CNTN2Q02246 1040 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 TNIP1Q15025 636 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 SUPT20HL1Q3ZLR7 823 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 LLGL2Q6P1M3 1020 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 H2AFVQ71UI9 128 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 U2AF1L4Q8WU68 220 aaKnown RBP11.02□□□□□ -0.65
HIF1A-203ENST00000394997 POMGNT1Q8WZA1 660 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 SAAL1Q96ER3 474 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 AP1M1Q9BXS5 423 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 DDX47Q9H0S4 455 aaKnown RBP11.02□□□□□ -0.65
HIF1A-203ENST00000394997 LUC7LQ9NQ29 371 aaKnown RBP11.02□□□□□ -0.65
HIF1A-203ENST00000394997 ALG6Q9Y672 507 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 A0A0G2JLL6 359 aaPredicted RBP11.02□□□□□ -0.65
HIF1A-203ENST00000394997 LGR5O75473 907 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 GUCY1A3Q02108 690 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 PSMD6Q15008 389 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 GPAT2Q6NUI2 795 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 KDM7AQ6ZMT4 941 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 PRRT2Q7Z6L0 340 aaPredicted RBP11.02□□□□□ -0.65
HIF1A-203ENST00000394997 TCP11Q8WWU5 503 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 RPS6KC1Q96S38 1066 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 HOMER2Q9NSB8 354 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 PTPRDP23468 1912 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 KCNK3O14649 394 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 TTI1O43156 1089 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 ATMINO43313 823 aaPredicted RBP11.02□□□□□ -0.65
HIF1A-203ENST00000394997 STAM2O75886 525 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 PYGMP11217 842 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 GUCY2DQ02846 1103 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 SPDYCQ5MJ68 293 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 RPUSD2Q8IZ73 545 aaKnown RBP11.02□□□□□ -0.65
HIF1A-203ENST00000394997 WDTC1Q8N5D0 677 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 DDX27Q96GQ7 796 aaKnown RBP11.02□□□□□ -0.65
HIF1A-203ENST00000394997 TXNRD2Q9NNW7 524 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 UBE2TQ9NPD8 197 aaPredicted RBP11.02□□□□□ -0.65
HIF1A-203ENST00000394997 AMACRQ9UHK6 382 aa11.02□□□□□ -0.65
HIF1A-203ENST00000394997 A0A0B4J269 797 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 IGHA2P01877 340 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 PAEPP09466 180 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 SCP2P22307 547 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 CDR2Q01850 454 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 PRKCEQ02156 737 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 CENPCQ03188 943 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 VGLL4Q14135 290 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 SNCBQ16143 134 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 CLEC16AQ2KHT3 1053 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 SNRNP48Q6IEG0 339 aaKnown RBP11.01□□□□□ -0.65
HIF1A-203ENST00000394997 CCDC62Q6P9F0 684 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 MAEAQ7L5Y9 396 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 CPXCR1Q8N123 301 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 BTBD6Q96KE9 485 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 EHMT1Q9H9B1 1298 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 SEPT11Q9NVA2 429 aaKnown RBP11.01□□□□□ -0.65
HIF1A-203ENST00000394997 GABBR1Q9UBS5 961 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 FRMPD3Q5JV73 1810 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 GOLGA8IPA6NC78 632 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 GOLGA8JA6NMD2 632 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 CHUKO15111 745 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 RTN2O75298 545 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 UBA1P22314 1058 aaKnown RBP11.01□□□□□ -0.65
HIF1A-203ENST00000394997 BRDTQ58F21 947 aaPredicted RBP11.01□□□□□ -0.65
HIF1A-203ENST00000394997 RNF25Q96BH1 459 aaPredicted RBP11.01□□□□□ -0.65
HIF1A-203ENST00000394997 SLITRK6Q9H5Y7 841 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 PPP2R3BQ9Y5P8 575 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 GOLGA6L10A0A0M3HER8 536 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 C3orf70A6NLC5 250 aaPredicted RBP11.01□□□□□ -0.65
HIF1A-203ENST00000394997 C19orf81C9J6K1 198 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 GOLGA8KD6RF30 607 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 CYP26A1O43174 497 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 GJA5P36382 358 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 ALDH5A1P51649 535 aaPredicted RBP11.01□□□□□ -0.65
HIF1A-203ENST00000394997 BIRC2Q13490 618 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 ARFGAP2Q8N6H7 521 aa11.01□□□□□ -0.65
HIF1A-203ENST00000394997 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.01□□□□□ -0.65
HIF1A-203ENST00000394997 LARSQ9P2J5 1176 aaKnown RBP11.01□□□□□ -0.65
HIF1A-203ENST00000394997 DENND3A2RUS2 1198 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 PGRMC1O00264 195 aaKnown RBP11□□□□□ -0.65
HIF1A-203ENST00000394997 CCND2P30279 289 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 SEC24CP53992 1094 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 RPS6KA1Q15418 735 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 RDH13Q8NBN7 331 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 DNERQ8NFT8 737 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 ZBTB45Q96K62 511 aaPredicted RBP11□□□□□ -0.65
HIF1A-203ENST00000394997 RNPC3Q96LT9 517 aaKnown RBP11□□□□□ -0.65
HIF1A-203ENST00000394997 JPH1Q9HDC5 661 aaPredicted RBP11□□□□□ -0.65
HIF1A-203ENST00000394997 TRPC6Q9Y210 931 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 FTLP02792 175 aaPredicted RBP11□□□□□ -0.65
HIF1A-203ENST00000394997 VIMP08670 466 aaKnown RBP11□□□□□ -0.65
HIF1A-203ENST00000394997 TNFAIP1Q13829 316 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 C6orf89Q6UWU4 347 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 RIOX2Q8IUF8 465 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 WRNIP1Q96S55 665 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 FRMD4BQ9Y2L6 1034 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 EXOC3O60645 756 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 ADCY2Q08462 1091 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 CAPSQ13938 189 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 LRIG3Q6UXM1 1119 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 C18orf8Q96DM3 657 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 IWS1Q96ST2 819 aa11□□□□□ -0.65
HIF1A-203ENST00000394997 XYLT2Q9H1B5 865 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms