RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 NCAM2O15394 837 aa17.5■□□□□ 0.39
SNCA-205ENST00000394991 EDN1P05305 212 aa17.5■□□□□ 0.39
SNCA-205ENST00000394991 RHOP08100 348 aa17.5■□□□□ 0.39
SNCA-205ENST00000394991 FCARP24071 287 aa17.5■□□□□ 0.39
SNCA-205ENST00000394991 ADCY1Q08828 1119 aa17.5■□□□□ 0.39
SNCA-205ENST00000394991 CDCA2Q69YH5 1023 aaPredicted RBP17.5■□□□□ 0.39
SNCA-205ENST00000394991 PDXDC1Q6P996 788 aa17.5■□□□□ 0.39
SNCA-205ENST00000394991 CD300LGQ6UXG3 332 aa17.5■□□□□ 0.39
SNCA-205ENST00000394991 ZNF852Q6ZMS4 543 aa17.5■□□□□ 0.39
SNCA-205ENST00000394991 PIGOQ8TEQ8 1089 aa17.5■□□□□ 0.39
SNCA-205ENST00000394991 PRIMPOLQ96LW4 560 aa17.5■□□□□ 0.39
SNCA-205ENST00000394991 PRMT7Q9NVM4 692 aaPredicted RBP17.5■□□□□ 0.39
SNCA-205ENST00000394991 USP20Q9Y2K6 914 aa17.5■□□□□ 0.39
SNCA-205ENST00000394991 CDY1Q9Y6F8 540 aa17.5■□□□□ 0.39
SNCA-205ENST00000394991 BAG4O95429 457 aaKnown RBP17.49■□□□□ 0.39
SNCA-205ENST00000394991 ADRB1P08588 477 aa17.49■□□□□ 0.39
SNCA-205ENST00000394991 LPAL2Q16609 132 aa17.49■□□□□ 0.39
SNCA-205ENST00000394991 FAM187BQ17R55 369 aa17.49■□□□□ 0.39
SNCA-205ENST00000394991 CPLX2Q6PUV4 134 aaKnown RBP17.49■□□□□ 0.39
SNCA-205ENST00000394991 MAEAQ7L5Y9 396 aa17.49■□□□□ 0.39
SNCA-205ENST00000394991 NOSTRINQ8IVI9 506 aa17.49■□□□□ 0.39
SNCA-205ENST00000394991 DNASE1L2Q92874 299 aa17.49■□□□□ 0.39
SNCA-205ENST00000394991 DDX27Q96GQ7 796 aaKnown RBP17.49■□□□□ 0.39
SNCA-205ENST00000394991 FAM126AQ9BYI3 521 aaPredicted RBP17.49■□□□□ 0.39
SNCA-205ENST00000394991 CHRDQ9H2X0 955 aa17.49■□□□□ 0.39
SNCA-205ENST00000394991 GDE1Q9NZC3 331 aa17.49■□□□□ 0.39
SNCA-205ENST00000394991 GMEB2Q9UKD1 530 aa17.49■□□□□ 0.39
SNCA-205ENST00000394991 NDRG2Q9UN36 371 aaKnown RBP17.49■□□□□ 0.39
SNCA-205ENST00000394991 MRPS17Q9Y2R5 130 aaKnown RBP17.49■□□□□ 0.39
SNCA-205ENST00000394991 CITO14578 2027 aa17.48■□□□□ 0.39
SNCA-205ENST00000394991 TMEM189-UBE2V1I3L0A0 370 aa17.48■□□□□ 0.39
SNCA-205ENST00000394991 N4BP3O15049 544 aa17.48■□□□□ 0.39
SNCA-205ENST00000394991 TKTP29401 623 aaKnown RBP17.48■□□□□ 0.39
SNCA-205ENST00000394991 SPEM2Q0P670 501 aa17.48■□□□□ 0.39
SNCA-205ENST00000394991 GRM2Q14416 872 aa17.48■□□□□ 0.39
SNCA-205ENST00000394991 EEF1DP3Q658K8 133 aa17.48■□□□□ 0.39
SNCA-205ENST00000394991 BSNDQ8WZ55 320 aa17.48■□□□□ 0.39
SNCA-205ENST00000394991 ELSPBP1Q96BH3 223 aa17.48■□□□□ 0.39
SNCA-205ENST00000394991 CCDC43Q96MW1 224 aaKnown RBP17.48■□□□□ 0.39
SNCA-205ENST00000394991 AVENQ9NQS1 362 aaPredicted RBP17.48■□□□□ 0.39
SNCA-205ENST00000394991 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.48■□□□□ 0.39
SNCA-205ENST00000394991 STK36Q9NRP7 1315 aa17.47■□□□□ 0.39
SNCA-205ENST00000394991 I3L4J1 428 aa17.47■□□□□ 0.39
SNCA-205ENST00000394991 WNT7AO00755 349 aa17.47■□□□□ 0.39
SNCA-205ENST00000394991 SCRN1Q12765 414 aa17.47■□□□□ 0.39
SNCA-205ENST00000394991 NR5A1Q13285 461 aa17.47■□□□□ 0.39
SNCA-205ENST00000394991 GLRA4Q5JXX5 417 aa17.47■□□□□ 0.39
SNCA-205ENST00000394991 PRSS36Q5K4E3 855 aa17.47■□□□□ 0.39
SNCA-205ENST00000394991 RTL10Q7L3V2 364 aa17.47■□□□□ 0.39
SNCA-205ENST00000394991 C3orf58Q8NDZ4 430 aa17.47■□□□□ 0.39
SNCA-205ENST00000394991 TNFRSF25Q93038 417 aa17.47■□□□□ 0.39
SNCA-205ENST00000394991 TCEAL4Q96EI5 215 aa17.47■□□□□ 0.39
SNCA-205ENST00000394991 PCDHA12Q9UN75 941 aa17.47■□□□□ 0.39
SNCA-205ENST00000394991 GDAQ9Y2T3 454 aa17.47■□□□□ 0.39
SNCA-205ENST00000394991 BACE2Q9Y5Z0 518 aa17.47■□□□□ 0.39
SNCA-205ENST00000394991 CYP46A1Q9Y6A2 500 aa17.47■□□□□ 0.39
SNCA-205ENST00000394991 ZFHX4Q86UP3 3567 aa17.46■□□□□ 0.39
SNCA-205ENST00000394991 SPAG17Q6Q759 2223 aa17.46■□□□□ 0.39
SNCA-205ENST00000394991 ARHGEF37A1IGU5 675 aa17.46■□□□□ 0.39
SNCA-205ENST00000394991 B3GAT3O94766 335 aa17.46■□□□□ 0.39
SNCA-205ENST00000394991 PRKCBP05771 671 aa17.46■□□□□ 0.39
SNCA-205ENST00000394991 BRCC3P46736 316 aa17.46■□□□□ 0.39
SNCA-205ENST00000394991 CLCNKBP51801 687 aa17.46■□□□□ 0.39
SNCA-205ENST00000394991 ROR1Q01973 937 aa17.46■□□□□ 0.39
SNCA-205ENST00000394991 ST3GAL2Q16842 350 aa17.46■□□□□ 0.39
SNCA-205ENST00000394991 FAM78AQ5JUQ0 283 aa17.46■□□□□ 0.39
SNCA-205ENST00000394991 CENPQQ7L2Z9 268 aaPredicted RBP17.46■□□□□ 0.39
SNCA-205ENST00000394991 ZBTB8OSQ8IWT0 167 aa17.46■□□□□ 0.39
SNCA-205ENST00000394991 PPP1R10Q96QC0 940 aaKnown RBP17.46■□□□□ 0.39
SNCA-205ENST00000394991 CCDC113Q9H0I3 377 aa17.46■□□□□ 0.39
SNCA-205ENST00000394991 TTC12Q9H892 705 aaPredicted RBP17.46■□□□□ 0.39
SNCA-205ENST00000394991 GOLGA2P5Q9HBQ8 144 aa17.46■□□□□ 0.39
SNCA-205ENST00000394991 GREB1Q4ZG55 1949 aa17.46■□□□□ 0.39
SNCA-205ENST00000394991 CACNA1GO43497 2377 aa17.46■□□□□ 0.39
SNCA-205ENST00000394991 WDR27A2RRH5 827 aa17.45■□□□□ 0.38
SNCA-205ENST00000394991 SLC30A4O14863 429 aa17.45■□□□□ 0.38
SNCA-205ENST00000394991 SPATA31C1P0DKV0 1188 aa17.45■□□□□ 0.38
SNCA-205ENST00000394991 CCR2P41597 374 aa17.45■□□□□ 0.38
SNCA-205ENST00000394991 RBM25P49756 843 aaKnown RBP17.45■□□□□ 0.38
SNCA-205ENST00000394991 PRPF4BQ13523 1007 aaKnown RBP17.45■□□□□ 0.38
SNCA-205ENST00000394991 CALCRLQ16602 461 aa17.45■□□□□ 0.38
SNCA-205ENST00000394991 LAIR1Q6GTX8 287 aa17.45■□□□□ 0.38
SNCA-205ENST00000394991 MAMSTRQ6ZN01 415 aa17.45■□□□□ 0.38
SNCA-205ENST00000394991 BRD9Q9H8M2 597 aa17.45■□□□□ 0.38
SNCA-205ENST00000394991 SDK1Q7Z5N4 2213 aa17.45■□□□□ 0.38
SNCA-205ENST00000394991 NCANO14594 1321 aa17.45■□□□□ 0.38
SNCA-205ENST00000394991 KIF26AQ9ULI4 1882 aaPredicted RBP17.44■□□□□ 0.38
SNCA-205ENST00000394991 MAN2B1O00754 1011 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 REC8O95072 547 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 CTDNEP1O95476 244 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 LRG1P02750 347 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 XRCC6P12956 609 aaKnown RBP eCLIP17.44■□□□□ 0.38
SNCA-205ENST00000394991 PTPN2P17706 415 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 XBP1P17861 261 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 LIG1P18858 919 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 TXKP42681 527 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 MAPK6Q16659 721 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 UPP1Q16831 310 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 TMEM132AQ24JP5 1023 aa17.44■□□□□ 0.38
SNCA-205ENST00000394991 PPM1JQ5JR12 505 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms