RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 ZNF131P52739 623 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 FZD5Q13467 585 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 SAFBQ15424 915 aaKnown RBP eCLIP6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 NOSTRINQ8IVI9 506 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 SYNPOQ8N3V7 929 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 C12orf76Q8N812 135 aaPredicted RBP6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 AUTS2Q8WXX7 1259 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 IFT74Q96LB3 600 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 AK8Q96MA6 479 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 DUSP9Q99956 384 aaKnown RBP6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 TOPORSQ9NS56 1045 aaPredicted RBP6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 NOL7Q9UMY1 257 aaKnown RBP6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 INPP5FQ9Y2H2 1132 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 STYXL1Q9Y6J8 313 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 BTBD18B2RXH4 712 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 INO80B-WBP1J3KQ70 363 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 WNT7AO00755 349 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 TADA2AO75478 443 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 AKAP3O75969 853 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 LMNAP02545 664 aaKnown RBP6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 PFKLP17858 780 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 ATF7IP2Q5U623 682 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 ZBTB33Q86T24 672 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 NT5DC4Q86YG4 428 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 RNF169Q8NCN4 708 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 ZNF461Q8TAF7 563 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 LRRC3Q9BY71 257 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 MRPL4Q9BYD3 311 aaKnown RBP6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 PPP4R2Q9NY27 417 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 NAP1L2Q9ULW6 460 aaPredicted RBP6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 LAMA2P24043 3122 aaKnown RBP6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 FAM205CA6NFA0 338 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 PRR5-ARHGAP8B1AHC4 643 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 ARNTLO00327 626 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 B4GALT5O43286 388 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 FAM189A1O60320 539 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 EDN1P05305 212 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 ARHGAP8P85298 464 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 TTC38Q5R3I4 469 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 PPM1LQ5SGD2 360 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 AXDND1Q5T1B0 1012 aaPredicted RBP6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 MPZL3Q6UWV2 235 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 TMC5Q6UXY8 1006 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 TAS1R3Q7RTX0 852 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 C1orf210Q8IVY1 113 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 TMEM87AQ8NBN3 555 aa6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 TRIM6Q9C030 488 aaPredicted RBP6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 AFF4Q9UHB7 1163 aaKnown RBP6.85□□□□□ -1.31
SMARCAD1-203ENST00000394961 CCDC163A0A0D9SF12 145 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 ARHGEF35A5YM69 484 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 LARGE1O95461 756 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 ATF2P15336 505 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 PTPN2P17706 415 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 LIMK1P53667 647 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 ATP2C1P98194 919 aaPredicted RBP6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 MAP4K3Q8IVH8 894 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 NPAS3Q8IXF0 933 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 DAW1Q8N136 415 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 SYT2Q8N9I0 419 aaPredicted RBP6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 LEO1Q8WVC0 666 aaPredicted RBP6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 RIN2Q8WYP3 895 aaPredicted RBP6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 ZFP42Q96MM3 310 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 MFSD1Q9H3U5 465 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 LTB4R2Q9NPC1 389 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 ZSCAN32Q9NX65 697 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 MRPS17Q9Y2R5 130 aaKnown RBP6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 NCOR1O75376 2440 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 OR6C75A6NL08 312 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 NCAM2O15394 837 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 CSDE1O75534 798 aaKnown RBP6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 BMP15O95972 392 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 C8AP07357 584 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 FAM163BP0C2L3 166 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 NRLP54845 237 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 IRX6P78412 446 aaPredicted RBP6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 LIN9Q5TKA1 542 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 FRMD5Q7Z6J6 570 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 SIX5Q8N196 739 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 DEPTORQ8TB45 409 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 CCDC94Q9BW85 323 aaPredicted RBP6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 CDT1Q9H211 546 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 CHRDQ9H2X0 955 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 SIT1Q9Y3P8 196 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 NUMBLQ9Y6R0 609 aa6.84□□□□□ -1.31
SMARCAD1-203ENST00000394961 TTC28Q96AY4 2481 aa6.84□□□□□ -1.32
SMARCAD1-203ENST00000394961 ZBTB39O15060 712 aa6.84□□□□□ -1.32
SMARCAD1-203ENST00000394961 ASGR2P07307 311 aa6.84□□□□□ -1.32
SMARCAD1-203ENST00000394961 ZNF268Q14587 947 aaPredicted RBP6.84□□□□□ -1.32
SMARCAD1-203ENST00000394961 DNMT3BQ9UBC3 853 aaKnown RBP6.84□□□□□ -1.32
SMARCAD1-203ENST00000394961 SMIM28A0A1B0GU29 152 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 MEFVO15553 781 aaPredicted RBP6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 FCHO2Q0JRZ9 810 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 APPL2Q8NEU8 664 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 KIF2CQ99661 725 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 MMTAG2Q9BU76 263 aaKnown RBP6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 SMOC2Q9H3U7 446 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 C8orf33Q9H7E9 229 aaPredicted RBP6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 SNTG2Q9NY99 539 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 WDR27A2RRH5 827 aa6.83□□□□□ -1.32
SMARCAD1-203ENST00000394961 POTEMA6NI47 508 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms