RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 BEND6Q5SZJ8 279 aaPredicted RBP10.96□□□□□ -0.66
COL4A6-203ENST00000394872 HHIPL2Q6UWX4 724 aa10.96□□□□□ -0.66
COL4A6-203ENST00000394872 USP33Q8TEY7 942 aa10.96□□□□□ -0.66
COL4A6-203ENST00000394872 CPA5Q8WXQ8 436 aa10.96□□□□□ -0.66
COL4A6-203ENST00000394872 DDX47Q9H0S4 455 aaKnown RBP10.96□□□□□ -0.66
COL4A6-203ENST00000394872 SENP1Q9P0U3 644 aa10.96□□□□□ -0.66
COL4A6-203ENST00000394872 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.96□□□□□ -0.66
COL4A6-203ENST00000394872 ARHGAP10A1A4S6 786 aa10.96□□□□□ -0.66
COL4A6-203ENST00000394872 TFRCP02786 760 aaKnown RBP10.96□□□□□ -0.66
COL4A6-203ENST00000394872 AKT1P31749 480 aa10.96□□□□□ -0.66
COL4A6-203ENST00000394872 CPT1AP50416 773 aa10.96□□□□□ -0.66
COL4A6-203ENST00000394872 MAGOHP61326 146 aaKnown RBP10.96□□□□□ -0.66
COL4A6-203ENST00000394872 SV2CQ496J9 727 aa10.96□□□□□ -0.66
COL4A6-203ENST00000394872 VCPKMTQ9H867 229 aa10.96□□□□□ -0.66
COL4A6-203ENST00000394872 NYAP2Q9P242 653 aa10.96□□□□□ -0.66
COL4A6-203ENST00000394872 PCDHGB4Q9UN71 923 aa10.96□□□□□ -0.66
COL4A6-203ENST00000394872 CDC42BPBQ9Y5S2 1711 aa10.96□□□□□ -0.66
COL4A6-203ENST00000394872 NR3C2P08235 984 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 RFC5P40937 340 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 PRKCEQ02156 737 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 KRT17Q04695 432 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 SHC4Q6S5L8 630 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 GLB1LQ6UWU2 654 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 RGS9BPQ6ZS82 235 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 ST13P4Q8IZP2 240 aaPredicted RBP10.95□□□□□ -0.66
COL4A6-203ENST00000394872 FAM151AQ8WW52 585 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 AGAP3Q96P47 875 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 NUDT12Q9BQG2 462 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 ING2Q9H160 280 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 TTC26A0AVF1 554 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 STYK1Q6J9G0 422 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 EFCAB12Q6NXP0 572 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 MARCH10Q8NA82 808 aaPredicted RBP10.95□□□□□ -0.66
COL4A6-203ENST00000394872 HPS3Q969F9 1004 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 SRPK1Q96SB4 655 aaKnown RBP10.95□□□□□ -0.66
COL4A6-203ENST00000394872 EHD2Q9NZN4 543 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 FAM187AA6NFU0 413 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 TLR2O60603 784 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 CAMTA2O94983 1202 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 SLC1A1P43005 524 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 SF3B3Q15393 1217 aaKnown RBP10.95□□□□□ -0.66
COL4A6-203ENST00000394872 SGSM1Q2NKQ1 1148 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 C1orf146Q5VVC0 180 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 PLA2G4FQ68DD2 849 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 REEP2Q9BRK0 252 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 CHCHD3Q9NX63 227 aaKnown RBP10.95□□□□□ -0.66
COL4A6-203ENST00000394872 DCTN4Q9UJW0 460 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 SPHKAPQ2M3C7 1700 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 FOXN1O15353 648 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 PSMD3O43242 534 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 TEX33O43247 280 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 PDAP1Q13442 181 aaKnown RBP10.95□□□□□ -0.66
COL4A6-203ENST00000394872 NCAPHQ15003 741 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 ADCK2Q7Z695 626 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 SLC30A5Q8TAD4 765 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 CLMNQ96JQ2 1002 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 TMEM39BQ9GZU3 492 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 IQGAP3Q86VI3 1631 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 C3orf70A6NLC5 250 aaPredicted RBP10.95□□□□□ -0.66
COL4A6-203ENST00000394872 IL18RAPO95256 599 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 DPEP1P16444 411 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 SESN2P58004 480 aaPredicted RBP10.95□□□□□ -0.66
COL4A6-203ENST00000394872 ZC3H12BQ5HYM0 836 aaKnown RBP10.95□□□□□ -0.66
COL4A6-203ENST00000394872 SYCP2LQ5T4T6 812 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 TEDDM1Q5T9Z0 273 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 ATF7IP2Q5U623 682 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 C16orf86Q6ZW13 317 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 FOPNLQ96NB1 174 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 STX18Q9P2W9 335 aaKnown RBP10.95□□□□□ -0.66
COL4A6-203ENST00000394872 ATP5HO75947 161 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 CYP2C9P11712 490 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 FCGRTP55899 365 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 TRIM28Q13263 835 aaKnown RBP10.95□□□□□ -0.66
COL4A6-203ENST00000394872 SEMA3FQ13275 785 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 PDCLQ13371 301 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 SBK1Q52WX2 424 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 SDE2Q6IQ49 451 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 ANKMY2Q8IV38 441 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 RCOR2Q8IZ40 523 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 AGR3Q8TD06 166 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 SPATA31A1Q5TZJ5 1347 aa10.95□□□□□ -0.66
COL4A6-203ENST00000394872 GFAPP14136 432 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 ACTR2P61160 394 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 ARHGEF7Q14155 803 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 KCNB1Q14721 858 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 DHX40Q8IX18 779 aaKnown RBP10.94□□□□□ -0.66
COL4A6-203ENST00000394872 DCP1BQ8IZD4 617 aaKnown RBP10.94□□□□□ -0.66
COL4A6-203ENST00000394872 ADGRB3O60242 1522 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 HAUS5O94927 633 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 WASHC5Q12768 1159 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 MEI1Q5TIA1 1274 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 RRM2BQ7LG56 351 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 TGS1Q96RS0 853 aaKnown RBP10.94□□□□□ -0.66
COL4A6-203ENST00000394872 MOV10L1Q9BXT6 1211 aaKnown RBP10.94□□□□□ -0.66
COL4A6-203ENST00000394872 APEX2Q9UBZ4 518 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 EEF2KO00418 725 aaKnown RBP10.94□□□□□ -0.66
COL4A6-203ENST00000394872 HIST1H2AGP0C0S8 130 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-203ENST00000394872 PDGFRAP16234 1089 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 HIST1H2ADP20671 130 aa10.94□□□□□ -0.66
COL4A6-203ENST00000394872 GGCXP38435 758 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms