RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 SMIM10L2BP0DMW5 78 aa13.56□□□□□ -0.24
SSH2-203ENST00000394848 TNFAIP3P21580 790 aa13.56□□□□□ -0.24
SSH2-203ENST00000394848 NAP1L1P55209 391 aaKnown RBP13.56□□□□□ -0.24
SSH2-203ENST00000394848 PURAQ00577 322 aaKnown RBP13.56□□□□□ -0.24
SSH2-203ENST00000394848 ZNF568Q3ZCX4 644 aa13.56□□□□□ -0.24
SSH2-203ENST00000394848 NFRKBQ6P4R8 1299 aa13.56□□□□□ -0.24
SSH2-203ENST00000394848 GLYCTKQ8IVS8 523 aa13.56□□□□□ -0.24
SSH2-203ENST00000394848 BRSK2Q8IWQ3 736 aa13.56□□□□□ -0.24
SSH2-203ENST00000394848 THNSL1Q8IYQ7 743 aa13.56□□□□□ -0.24
SSH2-203ENST00000394848 FAM71AQ8IYT1 594 aa13.56□□□□□ -0.24
SSH2-203ENST00000394848 PCSK9Q8NBP7 692 aaKnown RBP13.56□□□□□ -0.24
SSH2-203ENST00000394848 U2AF1L4Q8WU68 220 aaKnown RBP13.56□□□□□ -0.24
SSH2-203ENST00000394848 SCLT1Q96NL6 688 aa13.56□□□□□ -0.24
SSH2-203ENST00000394848 NOX5Q96PH1 765 aa13.56□□□□□ -0.24
SSH2-203ENST00000394848 TSEN34Q9BSV6 310 aaKnown RBP13.56□□□□□ -0.24
SSH2-203ENST00000394848 PI4K2AQ9BTU6 479 aa13.56□□□□□ -0.24
SSH2-203ENST00000394848 CARD6Q9BX69 1037 aa13.56□□□□□ -0.24
SSH2-203ENST00000394848 PACSIN1Q9BY11 444 aa13.56□□□□□ -0.24
SSH2-203ENST00000394848 SALL4Q9UJQ4 1053 aa13.56□□□□□ -0.24
SSH2-203ENST00000394848 CDC23Q9UJX2 597 aa13.56□□□□□ -0.24
SSH2-203ENST00000394848 CPSF3Q9UKF6 684 aaKnown RBP13.56□□□□□ -0.24
SSH2-203ENST00000394848 PTPRJQ12913 1337 aa13.56□□□□□ -0.24
SSH2-203ENST00000394848 ENC1O14682 589 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 PHACTR2O75167 634 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 SGPL1O95470 568 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 HLA-DRAP01903 254 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 MYL3P08590 195 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 PIK3CAP42336 1068 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 AP3M2P53677 418 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 MFSD10Q14728 455 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 SURF1Q15526 300 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 KCNA10Q16322 511 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 EEF1DP3Q658K8 133 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 ENOSF1Q7L5Y1 443 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 CDR2LQ86X02 465 aaPredicted RBP13.55□□□□□ -0.24
SSH2-203ENST00000394848 MNS1Q8NEH6 495 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 OR5B17Q8NGF7 314 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 LMBR1Q8WVP7 490 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 SHC3Q92529 594 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 FAM212AQ96EL1 285 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 FAM81BQ96LP2 452 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 ALS2CR12Q96Q35 445 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 AGPAT1Q99943 283 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 SYT11Q9BT88 431 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 NENFQ9UMX5 172 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 MOXD2PA6NHM9 499 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 VNN1O95497 513 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 ASGR1P07306 291 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 CAPN2P17655 700 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 GJA8P48165 433 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 PSEN2P49810 448 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 CDC42EP1Q00587 391 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 GCNT1Q02742 428 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 AMHR2Q16671 573 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 ZNF410Q86VK4 478 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 WDR49Q8IV35 697 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 LNX1Q8TBB1 728 aaPredicted RBP13.55□□□□□ -0.24
SSH2-203ENST00000394848 ELMO3Q96BJ8 720 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 C1orf112Q9NSG2 853 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 JRKLQ9Y4A0 524 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 CAPN6Q9Y6Q1 641 aa13.55□□□□□ -0.24
SSH2-203ENST00000394848 BTNL10A8MVZ5 291 aa13.54□□□□□ -0.24
SSH2-203ENST00000394848 HAS3O00219 553 aa13.54□□□□□ -0.24
SSH2-203ENST00000394848 CYP26A1O43174 497 aa13.54□□□□□ -0.24
SSH2-203ENST00000394848 BUB1O43683 1085 aa13.54□□□□□ -0.24
SSH2-203ENST00000394848 ATP1A1P05023 1023 aaKnown RBP13.54□□□□□ -0.24
SSH2-203ENST00000394848 H2AFZP0C0S5 128 aa13.54□□□□□ -0.24
SSH2-203ENST00000394848 OSTNP61366 133 aa13.54□□□□□ -0.24
SSH2-203ENST00000394848 NAA30Q147X3 362 aaPredicted RBP13.54□□□□□ -0.24
SSH2-203ENST00000394848 DUOXA2Q1HG44 320 aa13.54□□□□□ -0.24
SSH2-203ENST00000394848 PAPD7Q5XG87 772 aaKnown RBP13.54□□□□□ -0.24
SSH2-203ENST00000394848 H2AFVQ71UI9 128 aa13.54□□□□□ -0.24
SSH2-203ENST00000394848 SRGAP1Q7Z6B7 1085 aa13.54□□□□□ -0.24
SSH2-203ENST00000394848 LRRN4CLQ8ND94 238 aa13.54□□□□□ -0.24
SSH2-203ENST00000394848 OLIG1Q8TAK6 271 aa13.54□□□□□ -0.24
SSH2-203ENST00000394848 PPP1R13LQ8WUF5 828 aa13.54□□□□□ -0.24
SSH2-203ENST00000394848 MTG1Q9BT17 334 aaPredicted RBP13.54□□□□□ -0.24
SSH2-203ENST00000394848 CDT1Q9H211 546 aa13.54□□□□□ -0.24
SSH2-203ENST00000394848 SEPT11Q9NVA2 429 aaKnown RBP13.54□□□□□ -0.24
SSH2-203ENST00000394848 INTUQ9ULD6 942 aa13.54□□□□□ -0.24
SSH2-203ENST00000394848 SMIM35A0A1B0GVV1 85 aa13.53□□□□□ -0.24
SSH2-203ENST00000394848 ANO9A1A5B4 782 aa13.53□□□□□ -0.24
SSH2-203ENST00000394848 MBLAC1A4D2B0 266 aaPredicted RBP13.53□□□□□ -0.24
SSH2-203ENST00000394848 DNM1LO00429 736 aa13.53□□□□□ -0.24
SSH2-203ENST00000394848 CABYRO75952 493 aa13.53□□□□□ -0.24
SSH2-203ENST00000394848 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
SSH2-203ENST00000394848 MCF2P10911 925 aa13.53□□□□□ -0.24
SSH2-203ENST00000394848 ACLYP53396 1101 aa13.53□□□□□ -0.24
SSH2-203ENST00000394848 AMPD2Q01433 879 aa13.53□□□□□ -0.24
SSH2-203ENST00000394848 KIZQ2M2Z5 673 aa13.53□□□□□ -0.24
SSH2-203ENST00000394848 CXCL17Q6UXB2 119 aa13.53□□□□□ -0.24
SSH2-203ENST00000394848 DNAAF5Q86Y56 855 aa13.53□□□□□ -0.24
SSH2-203ENST00000394848 SLC20A1Q8WUM9 679 aa13.53□□□□□ -0.24
SSH2-203ENST00000394848 CPB2Q96IY4 423 aa13.53□□□□□ -0.24
SSH2-203ENST00000394848 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
SSH2-203ENST00000394848 KATNAL1Q9BW62 490 aa13.53□□□□□ -0.24
SSH2-203ENST00000394848 FAM49AQ9H0Q0 323 aaPredicted RBP13.53□□□□□ -0.24
SSH2-203ENST00000394848 ADAMTS10Q9H324 1103 aa13.53□□□□□ -0.24
SSH2-203ENST00000394848 RPF1Q9H9Y2 349 aaKnown RBP13.53□□□□□ -0.24
SSH2-203ENST00000394848 HDAC6Q9UBN7 1215 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms