RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 STOML1Q9UBI4 398 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 ANAPC4Q9UJX5 808 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 IRS2Q9Y4H2 1338 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 TMEM150BA6NC51 233 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 MED24O75448 989 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 PGM1P36871 562 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 MXI1P50539 228 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 CUL3Q13618 768 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 LRIG3Q6UXM1 1119 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 INTS2Q9H0H0 1204 aaKnown RBP9.37□□□□□ -0.91
RTN4-206ENST00000394611 DBNDD1Q9H9R9 158 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 FAF1Q9UNN5 650 aaPredicted RBP9.37□□□□□ -0.91
RTN4-206ENST00000394611 AGTP01019 485 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 KRT19P08727 400 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 BMP3P12645 472 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 PRELPP51888 382 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 GRIK5Q16478 980 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 CDO1Q16878 200 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 HGSNATQ68CP4 663 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 CC2D2BQ6DHV5 1058 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 ZNF804AQ7Z570 1209 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 RNF148Q8N7C7 305 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 POU5F2Q8N7G0 328 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 FAXDC2Q96IV6 333 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 RIOK1Q9BRS2 568 aaKnown RBP9.37□□□□□ -0.91
RTN4-206ENST00000394611 ANO3Q9BYT9 981 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 KDM4CQ9H3R0 1056 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 CHST7Q9NS84 486 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 GINS2Q9Y248 185 aa9.37□□□□□ -0.91
RTN4-206ENST00000394611 BZW2Q9Y6E2 419 aaKnown RBP9.37□□□□□ -0.91
RTN4-206ENST00000394611 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.37□□□□□ -0.91
RTN4-206ENST00000394611 PPIP5K2O43314 1243 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 PGM3O95394 542 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 SOX5P35711 763 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 NSFP46459 744 aaKnown RBP9.36□□□□□ -0.91
RTN4-206ENST00000394611 GCLCP48506 637 aaPredicted RBP9.36□□□□□ -0.91
RTN4-206ENST00000394611 PTDSS1P48651 473 aaKnown RBP9.36□□□□□ -0.91
RTN4-206ENST00000394611 KPNB1Q14974 876 aaKnown RBP9.36□□□□□ -0.91
RTN4-206ENST00000394611 TMEM259Q4ZIN3 620 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 FAXCQ5TGI0 409 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 WDR78Q5VTH9 848 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 SNX30Q5VWJ9 437 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 EXOC3L1Q86VI1 746 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 ADGRF4Q8IZF3 695 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 GALNT4Q8N4A0 578 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.36□□□□□ -0.91
RTN4-206ENST00000394611 RSAD2Q8WXG1 361 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 PPP1R16BQ96T49 567 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 DHX36Q9H2U1 1008 aaKnown RBP9.36□□□□□ -0.91
RTN4-206ENST00000394611 FBXO6Q9NRD1 293 aaPredicted RBP9.36□□□□□ -0.91
RTN4-206ENST00000394611 HEY2Q9UBP5 337 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 FLT1P17948 1338 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 B2RBV5 119 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 KRT1P04264 644 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 ETS1P14921 441 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 KRT4P19013 534 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 RFC1P35251 1148 aaPredicted RBP9.36□□□□□ -0.91
RTN4-206ENST00000394611 CACNA2D1P54289 1103 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 PEX3P56589 373 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 KCTD21Q4G0X4 260 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 ZNF483Q8TF39 744 aaPredicted RBP9.36□□□□□ -0.91
RTN4-206ENST00000394611 POMGNT1Q8WZA1 660 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 USP6NLQ92738 828 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 RTFDC1Q9BY42 306 aaPredicted RBP9.36□□□□□ -0.91
RTN4-206ENST00000394611 SAE1Q9UBE0 346 aaPredicted RBP9.36□□□□□ -0.91
RTN4-206ENST00000394611 SLC12A6Q9UHW9 1150 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 ARFGEF1Q9Y6D6 1849 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 AGRPO00253 132 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 RIPK2O43353 540 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 MT-ND3P03897 115 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 NELFEP18615 380 aaKnown RBP9.36□□□□□ -0.91
RTN4-206ENST00000394611 ARFIP2P53365 341 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 NPY5RQ15761 445 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 NT5DC3Q86UY8 548 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 LCA5Q86VQ0 697 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 RASSF3Q86WH2 238 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 PPM1NQ8N819 430 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 RBM46Q8TBY0 533 aaKnown RBP9.36□□□□□ -0.91
RTN4-206ENST00000394611 PYROXD1Q8WU10 500 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 CLPTM1LQ96KA5 538 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 TTYH3Q9C0H2 523 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 ADAM22Q9P0K1 906 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 AJAP1Q9UKB5 411 aaPredicted RBP9.36□□□□□ -0.91
RTN4-206ENST00000394611 PFASO15067 1338 aa9.36□□□□□ -0.91
RTN4-206ENST00000394611 PVALEFA0A1B0GWK0 134 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 A0A1W2PQJ5 194 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 LAD1O00515 517 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 SLC16A4O15374 487 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 CREB3O43889 395 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 DGKIO75912 1065 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 SGPL1O95470 568 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 INHBAP08476 426 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 GPC5P78333 572 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 GSTO1P78417 241 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 GRM4Q14833 912 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 FBXO33Q7Z6M2 555 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 RSPH3Q86UC2 560 aa9.35□□□□□ -0.91
RTN4-206ENST00000394611 GBP7Q8N8V2 638 aaPredicted RBP9.35□□□□□ -0.91
RTN4-206ENST00000394611 PIH1D1Q9NWS0 290 aaKnown RBP9.35□□□□□ -0.91
RTN4-206ENST00000394611 ETAA1Q9NY74 926 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms