RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 PRPHP41219 470 aa19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 CLCNKBP51801 687 aa19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 CD300LGQ6UXG3 332 aa19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 SLC7A14Q8TBB6 771 aa19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 FGF14Q92915 247 aa19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 SNX27Q96L92 541 aa19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 DRC1Q96MC2 740 aa19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 ACO2Q99798 780 aaKnown RBP19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 NTPCRQ9BSD7 190 aaKnown RBP19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 TIPINQ9BVW5 301 aa19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 CCDC94Q9BW85 323 aaPredicted RBP19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 AVENQ9NQS1 362 aaPredicted RBP19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 DDX19AQ9NUU7 478 aaKnown RBP19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 ARHGAP28Q9P2N2 729 aa19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 DNM3Q9UQ16 869 aa19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 USP20Q9Y2K6 914 aa19.21■□□□□ 0.67
SNRPA1-202ENST00000394082 DCHS1Q96JQ0 3298 aa19.2■□□□□ 0.66
SNRPA1-202ENST00000394082 CENPBP07199 599 aaPredicted RBP19.2■□□□□ 0.66
SNRPA1-202ENST00000394082 LIG1P18858 919 aa19.2■□□□□ 0.66
SNRPA1-202ENST00000394082 NPTX2P47972 431 aa19.2■□□□□ 0.66
SNRPA1-202ENST00000394082 YARSP54577 528 aaKnown RBP19.2■□□□□ 0.66
SNRPA1-202ENST00000394082 PTGDRQ13258 359 aa19.2■□□□□ 0.66
SNRPA1-202ENST00000394082 DMP1Q13316 513 aaPredicted RBP19.2■□□□□ 0.66
SNRPA1-202ENST00000394082 SLC8B1Q6J4K2 584 aa19.2■□□□□ 0.66
SNRPA1-202ENST00000394082 PARM1Q6UWI2 310 aa19.2■□□□□ 0.66
SNRPA1-202ENST00000394082 SNX29Q8TEQ0 813 aa19.2■□□□□ 0.66
SNRPA1-202ENST00000394082 BORCS6Q96GS4 357 aa19.2■□□□□ 0.66
SNRPA1-202ENST00000394082 DDX23Q9BUQ8 820 aaKnown RBP19.2■□□□□ 0.66
SNRPA1-202ENST00000394082 MRPL4Q9BYD3 311 aaKnown RBP19.2■□□□□ 0.66
SNRPA1-202ENST00000394082 SPTBN4Q9H254 2564 aa19.2■□□□□ 0.66
SNRPA1-202ENST00000394082 ZNF292O60281 2723 aa19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 DOCK6Q96HP0 2047 aa19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 FRYLO94915 3013 aa19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 KCNE1P15382 129 aa19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 PROZP22891 400 aa19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 TOB1P50616 345 aaPredicted RBP19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 PEX3P56589 373 aa19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 PFKPQ01813 784 aa19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 PRKCQQ04759 706 aa19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 GLRA4Q5JXX5 417 aa19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 KRT79Q5XKE5 535 aa19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 RSPO2Q6UXX9 243 aaPredicted RBP19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 DAW1Q8N136 415 aa19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 PJA1Q8NG27 643 aa19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 ZNF461Q8TAF7 563 aa19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 OSBPL6Q9BZF3 934 aa19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 CDT1Q9H211 546 aa19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 CDY1Q9Y6F8 540 aa19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 GVINP1Q7Z2Y8 2422 aa19.19■□□□□ 0.66
SNRPA1-202ENST00000394082 ARHGEF37A1IGU5 675 aa19.18■□□□□ 0.66
SNRPA1-202ENST00000394082 SYN3O14994 580 aa19.18■□□□□ 0.66
SNRPA1-202ENST00000394082 CCL16O15467 120 aa19.18■□□□□ 0.66
SNRPA1-202ENST00000394082 MCF2P10911 925 aa19.18■□□□□ 0.66
SNRPA1-202ENST00000394082 RPL9P32969 192 aaKnown RBP19.18■□□□□ 0.66
SNRPA1-202ENST00000394082 GPC5P78333 572 aa19.18■□□□□ 0.66
SNRPA1-202ENST00000394082 NTHL1P78549 312 aa19.18■□□□□ 0.66
SNRPA1-202ENST00000394082 ZNF568Q3ZCX4 644 aa19.18■□□□□ 0.66
SNRPA1-202ENST00000394082 PABPC1LQ4VXU2 614 aaKnown RBP19.18■□□□□ 0.66
SNRPA1-202ENST00000394082 C1orf210Q8IVY1 113 aa19.18■□□□□ 0.66
SNRPA1-202ENST00000394082 ADSSL1Q8N142 457 aa19.18■□□□□ 0.66
SNRPA1-202ENST00000394082 C3orf58Q8NDZ4 430 aa19.18■□□□□ 0.66
SNRPA1-202ENST00000394082 RPP25Q9BUL9 199 aaKnown RBP19.18■□□□□ 0.66
SNRPA1-202ENST00000394082 GDE1Q9NZC3 331 aa19.18■□□□□ 0.66
SNRPA1-202ENST00000394082 CNTN3Q9P232 1028 aa19.18■□□□□ 0.66
SNRPA1-202ENST00000394082 DNMT3BQ9UBC3 853 aaKnown RBP19.18■□□□□ 0.66
SNRPA1-202ENST00000394082 TRIP11Q15643 1979 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 CCDC169A6NNP5 214 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 ABLIM1O14639 778 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 TBC1D4O60343 1298 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 HIP1RO75146 1068 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 ABLIM3O94929 683 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 GUCY2CP25092 1073 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 TKTP29401 623 aaKnown RBP19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 MAPK7Q13164 816 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 NBR1Q14596 966 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 RINT1Q6NUQ1 792 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 ZC3H14Q6PJT7 736 aaKnown RBP19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 C1orf186Q6ZWK4 172 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 TAS1R3Q7RTX0 852 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 NPAS3Q8IXF0 933 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 ITFG1Q8TB96 612 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 SPIRE2Q8WWL2 714 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 ACAP3Q96P50 834 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 KIF2CQ99661 725 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 POLD4Q9HCU8 107 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 KMT5AQ9NQR1 393 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 MAFFQ9ULX9 164 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 POLIQ9UNA4 740 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 PCDHB6Q9Y5E3 794 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 MYH15Q9Y2K3 1946 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 NOTCH4Q99466 2003 aa19.17■□□□□ 0.66
SNRPA1-202ENST00000394082 KANSL1LA0AUZ9 987 aa19.16■□□□□ 0.66
SNRPA1-202ENST00000394082 MICAL2O94851 1124 aa19.16■□□□□ 0.66
SNRPA1-202ENST00000394082 LMNAP02545 664 aaKnown RBP19.16■□□□□ 0.66
SNRPA1-202ENST00000394082 ATF2P15336 505 aa19.16■□□□□ 0.66
SNRPA1-202ENST00000394082 IGFBP6P24592 240 aaPredicted RBP19.16■□□□□ 0.66
SNRPA1-202ENST00000394082 MAGEA9P43362 315 aa19.16■□□□□ 0.66
SNRPA1-202ENST00000394082 SOX4Q06945 474 aaPredicted RBP19.16■□□□□ 0.66
SNRPA1-202ENST00000394082 MRPL58Q14197 206 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms