RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 APLFQ8IW19 511 aaPredicted RBP16.06■□□□□ 0.16
SHTN1-204ENST00000392903 EPS8L3Q8TE67 593 aaKnown RBP16.06■□□□□ 0.16
SHTN1-204ENST00000392903 GLG1Q92896 1179 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 PDCD2LQ9BRP1 358 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 INTS2Q9H0H0 1204 aaKnown RBP16.06■□□□□ 0.16
SHTN1-204ENST00000392903 SEMA4AQ9H3S1 761 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.06■□□□□ 0.16
SHTN1-204ENST00000392903 GRHL1Q9NZI5 618 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 PRKAG3Q9UGI9 489 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 RASAL2Q9UJF2 1139 aa16.06■□□□□ 0.16
SHTN1-204ENST00000392903 RASGRF2O14827 1237 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 SORBS3O60504 671 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 FERP16591 822 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 RAB27AP51159 221 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 MYL7Q01449 175 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 CMPK2Q5EBM0 449 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 PHLDB3Q6NSJ2 640 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 NIPA1Q7RTP0 329 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 SPATA21Q7Z572 469 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 DHX37Q8IY37 1157 aaKnown RBP16.05■□□□□ 0.16
SHTN1-204ENST00000392903 FITM2Q8N6M3 262 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 FAM167BQ9BTA0 163 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 STK33Q9BYT3 514 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 PXMP2Q9NR77 195 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 TBC1D22BQ9NU19 505 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 PNMA3Q9UL41 463 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 SNX24Q9Y343 169 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 UBE4BO95155 1302 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 TCP11X1B4DZS4 312 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 E7ENQ6 273 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 AP1G2O75843 785 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 PLS3P13797 630 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 GNAZP19086 355 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 LMNB2Q03252 620 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 XKR9Q5GH70 373 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 FAM102BQ5T8I3 360 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 HAUS6Q7Z4H7 955 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 LNX1Q8TBB1 728 aaPredicted RBP16.05■□□□□ 0.16
SHTN1-204ENST00000392903 DYDC1Q8WWB3 177 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 ERVK-5Q9HDB9 667 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 SEPT11Q9NVA2 429 aaKnown RBP16.05■□□□□ 0.16
SHTN1-204ENST00000392903 APEX2Q9UBZ4 518 aa16.05■□□□□ 0.16
SHTN1-204ENST00000392903 NCANO14594 1321 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 GOLGA8IPA6NC78 632 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 GOLGA8JA6NMD2 632 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 RIPK2O43353 540 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 ABCB4P21439 1286 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 GCLMP48507 274 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 CTCFP49711 727 aaPredicted RBP16.04■□□□□ 0.16
SHTN1-204ENST00000392903 SP4Q02446 784 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 EXOC3L1Q86VI1 746 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 MFN1Q8IWA4 741 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 WRNIP1Q96S55 665 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 KIFC3Q9BVG8 833 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 ROPN1BQ9BZX4 212 aaPredicted RBP16.04■□□□□ 0.16
SHTN1-204ENST00000392903 TRIM7Q9C029 511 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 GPR88Q9GZN0 384 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 ROPN1Q9HAT0 212 aaPredicted RBP16.04■□□□□ 0.16
SHTN1-204ENST00000392903 RNF146Q9NTX7 359 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 MTRF1LQ9UGC7 380 aaKnown RBP16.04■□□□□ 0.16
SHTN1-204ENST00000392903 PARP2Q9UGN5 583 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 DBR1Q9UK59 544 aaKnown RBP16.04■□□□□ 0.16
SHTN1-204ENST00000392903 EMSYQ7Z589 1322 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 KRT13P13646 458 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 GALCP54803 685 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 HMGCS2P54868 508 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 SOX10P56693 466 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 PPP3CAQ08209 521 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 CCDC38Q502W7 563 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 RAB3IPQ96QF0 476 aaPredicted RBP16.04■□□□□ 0.16
SHTN1-204ENST00000392903 TELO2Q9Y4R8 837 aa16.04■□□□□ 0.16
SHTN1-204ENST00000392903 FOXN3O00409 490 aaPredicted RBP16.03■□□□□ 0.16
SHTN1-204ENST00000392903 PTGIRP43119 386 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 PAPOLAP51003 745 aaKnown RBP16.03■□□□□ 0.16
SHTN1-204ENST00000392903 BACE1P56817 501 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 PPATQ06203 517 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 CCDC15Q0P6D6 951 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 UBAP2Q5T6F2 1119 aaKnown RBP16.03■□□□□ 0.16
SHTN1-204ENST00000392903 SLC9A9Q8IVB4 645 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 ACCSQ96QU6 501 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 CCDC113Q9H0I3 377 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 TMEM206Q9H813 350 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 UBE2TQ9NPD8 197 aaPredicted RBP16.03■□□□□ 0.16
SHTN1-204ENST00000392903 OSGEPQ9NPF4 335 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 TRIM33Q9UPN9 1127 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 DPPA5A6NC42 116 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 UNC5CO95185 931 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 RARGP13631 454 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 COPB2P35606 906 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 SLCO1A2P46721 670 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 VAMP7P51809 220 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 PSMC5P62195 406 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 MRPS35P82673 323 aaKnown RBP16.03■□□□□ 0.16
SHTN1-204ENST00000392903 GHRHRQ02643 423 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 PRPF4BQ13523 1007 aaKnown RBP16.03■□□□□ 0.16
SHTN1-204ENST00000392903 NUGGCQ68CJ6 796 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 CWF19L1Q69YN2 538 aaKnown RBP16.03■□□□□ 0.16
SHTN1-204ENST00000392903 SNRNP48Q6IEG0 339 aaKnown RBP16.03■□□□□ 0.16
SHTN1-204ENST00000392903 ANO7Q6IWH7 933 aa16.03■□□□□ 0.16
SHTN1-204ENST00000392903 PALB2Q86YC2 1186 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms