RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 HOXA13P31271 388 aaPredicted RBP15.48■□□□□ 0.07
CCDC50-201ENST00000392455 RAB2AP61019 212 aa15.48■□□□□ 0.07
CCDC50-201ENST00000392455 ZNF589Q86UQ0 364 aaPredicted RBP15.48■□□□□ 0.07
CCDC50-201ENST00000392455 NT5DC4Q86YG4 428 aa15.48■□□□□ 0.07
CCDC50-201ENST00000392455 MCPH1Q8NEM0 835 aa15.48■□□□□ 0.07
CCDC50-201ENST00000392455 MDM1Q8TC05 714 aa15.48■□□□□ 0.07
CCDC50-201ENST00000392455 ZW10O43264 779 aa15.48■□□□□ 0.07
CCDC50-201ENST00000392455 MMP1P03956 469 aa15.48■□□□□ 0.07
CCDC50-201ENST00000392455 CYP19A1P11511 503 aaPredicted RBP15.48■□□□□ 0.07
CCDC50-201ENST00000392455 VSNL1P62760 191 aa15.48■□□□□ 0.07
CCDC50-201ENST00000392455 EFHC2Q5JST6 749 aa15.48■□□□□ 0.07
CCDC50-201ENST00000392455 TRIM65Q6PJ69 517 aa15.48■□□□□ 0.07
CCDC50-201ENST00000392455 LRRC39Q96DD0 335 aa15.48■□□□□ 0.07
CCDC50-201ENST00000392455 APOL4Q9BPW4 351 aa15.48■□□□□ 0.07
CCDC50-201ENST00000392455 PLAAQ9Y263 795 aa15.48■□□□□ 0.07
CCDC50-201ENST00000392455 DLGAP3O95886 979 aa15.48■□□□□ 0.07
CCDC50-201ENST00000392455 MYL3P08590 195 aa15.48■□□□□ 0.07
CCDC50-201ENST00000392455 WARSP23381 471 aaKnown RBP15.48■□□□□ 0.07
CCDC50-201ENST00000392455 SLCO1A2P46721 670 aa15.48■□□□□ 0.07
CCDC50-201ENST00000392455 CC2D2BQ6DHV5 1058 aa15.48■□□□□ 0.07
CCDC50-201ENST00000392455 CDH24Q86UP0 819 aa15.48■□□□□ 0.07
CCDC50-201ENST00000392455 EPN3Q9H201 632 aa15.48■□□□□ 0.07
CCDC50-201ENST00000392455 SERPINB9P50453 376 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 VEPH1Q14D04 833 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 ZNF667Q5HYK9 610 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 NDFIP2Q9NV92 336 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 MOSPD1Q9UJG1 213 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 PLA2G4BP0C869 781 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 STAT4Q14765 748 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 PROSER3Q2NL68 480 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 SYTL3Q4VX76 610 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 DSTYKQ6XUX3 929 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 RINLQ6ZS11 566 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 CFAP99D6REC4 459 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 TAF4O00268 1085 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 SEC31AO94979 1220 aaKnown RBP15.47■□□□□ 0.07
CCDC50-201ENST00000392455 USP17L8P0C7I0 530 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 FASTKD1Q53R41 847 aaKnown RBP15.47■□□□□ 0.07
CCDC50-201ENST00000392455 ANKS6Q68DC2 871 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 CYP4Z1Q86W10 505 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 OXCT2Q9BYC2 517 aaPredicted RBP15.47■□□□□ 0.07
CCDC50-201ENST00000392455 SOWAHDA6NJG2 315 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 CCND1P24385 295 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 STAT5AP42229 794 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 MAPKAPK2P49137 400 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 STAT5BP51692 787 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 CNTN1Q12860 1018 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 FAM196AQ6ZSG2 479 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 CYP4Z2PQ8N1L4 340 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 LCORLQ8N3X6 602 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 RIBC1Q8N443 379 aaPredicted RBP15.47■□□□□ 0.07
CCDC50-201ENST00000392455 ETNK1Q9HBU6 452 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 SAMD9Q5K651 1589 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 PEG3Q9GZU2 1588 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 ZNF24P17028 368 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 PLCG1P19174 1290 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 PIK3R1P27986 724 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 MAGEA10P43363 369 aaPredicted RBP15.47■□□□□ 0.07
CCDC50-201ENST00000392455 IREB2P48200 963 aaKnown RBP15.47■□□□□ 0.07
CCDC50-201ENST00000392455 ARL6IP4Q66PJ3 421 aaKnown RBP15.47■□□□□ 0.07
CCDC50-201ENST00000392455 K7ERI5 159 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 HUS1O60921 280 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 NDUFA10O95299 355 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 RALAP11233 206 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 CSE1LP55060 971 aaKnown RBP15.47■□□□□ 0.07
CCDC50-201ENST00000392455 ROR1Q01973 937 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 FAM162AQ96A26 154 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 LZTS1Q9Y250 596 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 H0Y3Z8 333 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 POU5F1BQ06416 359 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 DPCR1Q3MIW9 517 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 C2CD6Q53TS8 623 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 FAR2Q96K12 515 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 MAN1C1Q9NR34 630 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 KLC4Q9NSK0 619 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 PI4KBQ9UBF8 816 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 INPP5FQ9Y2H2 1132 aa15.47■□□□□ 0.07
CCDC50-201ENST00000392455 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.47■□□□□ 0.07
CCDC50-201ENST00000392455 PRKAB2O43741 272 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 TLR2O60603 784 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 RGS20O76081 388 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 CDC42EP1Q00587 391 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 LRRC8DQ7L1W4 858 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 AKAP10O43572 662 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 ARHGDIBP52566 201 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 SLC25A24Q6NUK1 477 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 CCDC60Q8IWA6 550 aaPredicted RBP15.46■□□□□ 0.07
CCDC50-201ENST00000392455 CCNYL1Q8N7R7 359 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 MSTO1Q9BUK6 570 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 SNPHO15079 494 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 IFNA14P01570 189 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 FCGR1AP12314 374 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 SPDYAQ5MJ70 313 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 DYNLL2Q96FJ2 89 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 STN1Q9H668 368 aaKnown RBP15.46■□□□□ 0.07
CCDC50-201ENST00000392455 SHROOM2Q13796 1616 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 TYK2P29597 1187 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 WDR60Q8WVS4 1066 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 VPS11Q9H270 941 aa15.46■□□□□ 0.07
CCDC50-201ENST00000392455 TRPC7Q9HCX4 862 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms