RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 CTSSP25774 331 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 CD40P25942 277 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 POLGP54098 1239 aaPredicted RBP2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 SOX10P56693 466 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 LRRC32Q14392 662 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 RASA3Q14644 834 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 ZNF260Q3ZCT1 412 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 VWA1Q6PCB0 445 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 YTHDF3Q7Z739 585 aaKnown RBP2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 NEK8Q86SG6 692 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 ZDHHC17Q8IUH5 632 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 GLB1L2Q8IW92 636 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 CKAP2LQ8IYA6 745 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 FBXO18Q8NFZ0 1043 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 DENND1AQ8TEH3 1009 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 PPP1R10Q96QC0 940 aaKnown RBP2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 SPRTNQ9H040 489 aaPredicted RBP2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 NCOA5Q9HCD5 579 aaKnown RBP2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 ANLNQ9NQW6 1124 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 ELOVL5Q9NYP7 299 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 PRSS50Q9UI38 385 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 ST3GAL5Q9UNP4 418 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 ZKSCAN5Q9Y2L8 839 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 MTO1Q9Y2Z2 717 aaKnown RBP2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 NUMBLQ9Y6R0 609 aa2.32□□□□□ -2.04
RNU6-239P-201ENST00000390990 CCDC151A5D8V7 595 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 ERVV-2B6SEH9 535 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 ADM5C9JUS6 153 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 MPPED1O15442 326 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 ERN1O75460 977 aaKnown RBP2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 DNAJC8O75937 253 aaPredicted RBP2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 TOP3BO95985 862 aaKnown RBP2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 ASLP04424 464 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 ALOX15P16050 662 aaPredicted RBP2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 EPHB2P29323 1055 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 MPGP29372 298 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 CRHR1P34998 444 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 PTPN7P35236 360 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 NR4A2P43354 598 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 ZNF134P52741 427 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 MEF2AQ02078 507 aaPredicted RBP2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 TRIM25Q14258 630 aaKnown RBP2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 UBXN2BQ14CS0 331 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 KRTAP27-1Q3LI81 207 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 SUPT20HL1Q3ZLR7 823 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 MIDNQ504T8 468 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 GPR158Q5T848 1215 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 FOXR2Q6PJQ5 311 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 ZNF66Q6ZN08 573 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 TSHZ1Q6ZSZ6 1077 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 ZNF572Q7Z3I7 529 aaPredicted RBP2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 COLGALT2Q8IYK4 626 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 SMRP1Q8NCR6 262 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 MARS2Q96GW9 593 aaKnown RBP2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 QTRT1Q9BXR0 403 aaKnown RBP2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 MS4A5Q9H3V2 200 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 NRIP3Q9NQ35 241 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 HSFX1Q9UBD0 423 aa2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 PPP1R1BQ9UD71 204 aaPredicted RBP2.31□□□□□ -2.04
RNU6-239P-201ENST00000390990 TRGV11A0A075B6L2 103 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 IGKV2D-30A0A075B6S6 120 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 CCDC163A0A0D9SF12 145 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 LINC00473A8K010 186 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 TGM5O43548 720 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 ORC4O43929 436 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 OPA1O60313 960 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 JMJD7P0C870 316 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 SFPQP23246 707 aaKnown RBP eCLIP2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 LINC00205P59089 165 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 CDCA2Q69YH5 1023 aaPredicted RBP2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 MEPCEQ7L2J0 689 aaKnown RBP2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 RASAL3Q86YV0 1011 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 TRMT2AQ8IZ69 625 aaKnown RBP2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 JMYQ8N9B5 988 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 Q8NA96 180 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 ZBTB8BQ8NAP8 495 aaPredicted RBP2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 ZSWIM2Q8NEG5 633 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 ZNF480Q8WV37 535 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 ZNF428Q96B54 188 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 FBXL20Q96IG2 436 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 HAPLN3Q96S86 360 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 SH2D3AQ9BRG2 576 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 MRI1Q9BV20 369 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 ANO3Q9BYT9 981 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 SEMA4CQ9C0C4 833 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 EBF3Q9H4W6 596 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 FBXO34Q9NWN3 711 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 WWOXQ9NZC7 414 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 SERGEFQ9UGK8 458 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 PPP2R3BQ9Y5P8 575 aa2.3□□□□□ -2.04
RNU6-239P-201ENST00000390990 PLD2O14939 933 aa2.29□□□□□ -2.04
RNU6-239P-201ENST00000390990 PROM1O43490 865 aa2.29□□□□□ -2.04
RNU6-239P-201ENST00000390990 STK10O94804 968 aaKnown RBP2.29□□□□□ -2.04
RNU6-239P-201ENST00000390990 POMCP01189 267 aa2.29□□□□□ -2.04
RNU6-239P-201ENST00000390990 SRGNP10124 158 aa2.29□□□□□ -2.04
RNU6-239P-201ENST00000390990 CKBP12277 381 aa2.29□□□□□ -2.04
RNU6-239P-201ENST00000390990 GATA3P23771 443 aa2.29□□□□□ -2.04
RNU6-239P-201ENST00000390990 SLC44A4Q53GD3 710 aa2.29□□□□□ -2.04
RNU6-239P-201ENST00000390990 RRP12Q5JTH9 1297 aaKnown RBP2.29□□□□□ -2.04
RNU6-239P-201ENST00000390990 AFMIDQ63HM1 303 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms