RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 OLFML3Q9NRN5 406 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 DZANK1Q9NVP4 752 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 CFAP45Q9UL16 551 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 PCDHA7Q9UN72 937 aa12.45□□□□□ -0.42
IGHV4-28-201ENST00000390612 SF3B1O75533 1304 aaKnown RBP eCLIP12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 LOC730098B7Z3J9 87 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 ANKRD63C9JTQ0 380 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 OGTO15294 1046 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 LIG4P49917 911 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 CLCNKBP51801 687 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 ITIH3Q06033 890 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 TPRNQ4KMQ1 711 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 SEZ6Q53EL9 994 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 RTP2Q5QGT7 225 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 RESP18Q5W5W9 173 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 LILRA6Q6PI73 481 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 PDILTQ8N807 584 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 C3orf58Q8NDZ4 430 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 PIK3R5Q8WYR1 880 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 DDX27Q96GQ7 796 aaKnown RBP12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 B3GALT6Q96L58 329 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 FBXL18Q96ME1 805 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 PHF7Q9BWX1 381 aaPredicted RBP12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 TNMDQ9H2S6 317 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 ZHX3Q9H4I2 956 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 SLC38A7Q9NVC3 462 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 ANKFY1Q9P2R3 1169 aa12.44□□□□□ -0.42
IGHV4-28-201ENST00000390612 PI4K2BG5E9Z4 385 aa12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 C2CD2LO14523 706 aa12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 HNRNPDLO14979 420 aaKnown RBP12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 CXCL8P10145 99 aa12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 FGFR3P22607 806 aa12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 KLRC2P26717 231 aa12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 RPL9P32969 192 aaKnown RBP12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 TNFSF9P41273 254 aa12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 POU5F1Q01860 360 aaKnown RBP12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 ELAVL2Q12926 359 aaKnown RBP12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 ENOX2Q16206 610 aaKnown RBP12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 KYAT1Q16773 422 aa12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 FOXD4L6Q3SYB3 417 aaPredicted RBP12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 ZBTB41Q5SVQ8 909 aa12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 FAM171A1Q5VUB5 890 aa12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 FOXD4L3Q6VB84 417 aaPredicted RBP12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 LNX1Q8TBB1 728 aaPredicted RBP12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 FEZF2Q8TBJ5 459 aa12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 HDAC7Q8WUI4 952 aa12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 C18orf25Q96B23 403 aaPredicted RBP12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 BICD1Q96G01 975 aa12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 TSPAN18Q96SJ8 248 aa12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 TTPALQ9BTX7 342 aa12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 RHOBTB2Q9BYZ6 727 aa12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 IKZF4Q9H2S9 585 aa12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 GOLGA2P5Q9HBQ8 144 aa12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 CPSF3Q9UKF6 684 aaKnown RBP12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 ZDBF2Q9HCK1 2354 aa12.43□□□□□ -0.42
IGHV4-28-201ENST00000390612 LACTBL1A8MY62 500 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 TISP43B9A030 160 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 B3GAT3O94766 335 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 ADH1AP07327 375 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 HARSP12081 509 aaKnown RBP12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 ADSSP30520 456 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 CA8P35219 290 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 CASP5P51878 434 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 KCNA1Q09470 495 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 HERC4Q5GLZ8 1057 aaPredicted RBP12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 L1TD1Q5T7N2 865 aaKnown RBP12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 SLFN12LQ6IEE8 588 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 KIAA1841Q6NSI8 718 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 KANK3Q6NY19 840 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 C12orf76Q8N812 135 aaPredicted RBP12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 IQUBQ8NA54 791 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 CMASQ8NFW8 434 aaPredicted RBP12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 HASPINQ8TF76 798 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 LEO1Q8WVC0 666 aaPredicted RBP12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 RIN2Q8WYP3 895 aaPredicted RBP12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 STAMQ92783 540 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 POP1Q99575 1024 aaKnown RBP12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 C7orf25Q9BPX7 421 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 CLSTN3Q9BQT9 956 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 FGFBP2Q9BYJ0 223 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 TRIM9Q9C026 710 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 EPHX3Q9H6B9 360 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 MRPL44Q9H9J2 332 aaKnown RBP12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 PANK4Q9NVE7 773 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 CDH22Q9UJ99 828 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 ZNF318Q5VUA4 2279 aa12.42□□□□□ -0.42
IGHV4-28-201ENST00000390612 FAM237AA0A1B0GTK4 181 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 PODXLO00592 558 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 POLR2DO15514 142 aaKnown RBP12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 TBC1D4O60343 1298 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 CYP3A5P20815 502 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 LRPAP1P30533 357 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 MTHFRP42898 656 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 ME1P48163 572 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 CREMQ03060 361 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 EHHADHQ08426 723 aa12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 MRPL58Q14197 206 aaKnown RBP12.41□□□□□ -0.42
IGHV4-28-201ENST00000390612 RARS2Q5T160 578 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms