RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 GOLGA6L9A6NEM1 432 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 CST3P01034 146 aaPredicted RBP13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 FAM228BP0C875 321 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 MCF2P10911 925 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 EIF4BP23588 611 aaKnown RBP13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 GNG11P61952 73 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 ETF1P62495 437 aaKnown RBP13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 KRT83P78385 493 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 TFAMQ00059 246 aaKnown RBP13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 SNX17Q15036 470 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 DHX38Q92620 1227 aaKnown RBP13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 VTI1AQ96AJ9 217 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 RPF1Q9H9Y2 349 aaKnown RBP13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 ACP6Q9NPH0 428 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 GUCA1BQ9UMX6 200 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 TRIM17Q9Y577 477 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 PCDHA13Q9Y5I0 950 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 PHACTR2O75167 634 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 CLSTN1O94985 981 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 LCA5LO95447 670 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 NPTXRO95502 500 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 MYCP01106 439 aaPredicted RBP13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 GNRH1P01148 92 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 FERP16591 822 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 PRKCIP41743 596 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 WDR49Q8IV35 697 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 SH3TC2Q8TF17 1288 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 EIF2AQ9BY44 585 aaKnown RBP13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 IFIH1Q9BYX4 1025 aaKnown RBP13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 PAXBP1Q9Y5B6 917 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 MYH10P35580 1976 aa13.15□□□□□ -0.3
SPTBN1-203ENST00000389980 LACTBL1A8MY62 500 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 CTSHP09668 335 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 RFX1P22670 979 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 GRK4P32298 578 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 CDC42EP1Q00587 391 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 NCOA4Q13772 614 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 NAA30Q147X3 362 aaPredicted RBP13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 CCDC122Q5T0U0 273 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 JAKMIP2Q96AA8 810 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 CXCL16Q9H2A7 254 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 APOBEC3GQ9HC16 384 aaKnown RBP13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 MKI67P46013 3256 aaKnown RBP13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 UMODL1Q5DID0 1318 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 CALCAP01258 141 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 NFICP08651 508 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 CLTAP09496 248 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 CST5P28325 142 aaPredicted RBP13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 MAGEA1P43355 309 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 VAV2P52735 878 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 MFAP3P55082 362 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 SLC18A3Q16572 532 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 SLC10A6Q3KNW5 377 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 TRAPPC11Q7Z392 1133 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 ADPGKQ9BRR6 497 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 C1orf112Q9NSG2 853 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 SAGE1Q9NXZ1 904 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 PIN4Q9Y237 131 aaKnown RBP13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 HES2Q9Y543 173 aa13.14□□□□□ -0.31
SPTBN1-203ENST00000389980 CYP26A1O43174 497 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 TMEM191BP0C7N4 346 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 DUOXA2Q1HG44 320 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 WDR44Q5JSH3 913 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 ZNF569Q5MCW4 686 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 LHX8Q68G74 356 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 JADE1Q6IE81 842 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 TAF2Q6P1X5 1199 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 RNF180Q86T96 592 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 ZNF710Q8N1W2 664 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 PCSK9Q8NBP7 692 aaKnown RBP13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 KIF18AQ8NI77 898 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 OLIG1Q8TAK6 271 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 SLC20A1Q8WUM9 679 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 PACSIN1Q9BY11 444 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 CELF4Q9BZC1 486 aaKnown RBP13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 HMX1Q9NP08 348 aaPredicted RBP13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 RNF19AQ9NV58 838 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 NUB1Q9Y5A7 615 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 BZW2Q9Y6E2 419 aaKnown RBP13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 CDY2AQ9Y6F7 541 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 MACROD2A1Z1Q3 448 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 KIF2AO00139 706 aaPredicted RBP13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 DDX3XO00571 662 aaKnown RBP eCLIP13.13□□□□□ -0.316e-26■■■■■ 27.3
SPTBN1-203ENST00000389980 B4GALT4O60513 344 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 SGPL1O95470 568 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 ACLYP53396 1101 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 CRYBB1P53674 252 aaPredicted RBP13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 MYL6P60660 151 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 MRPS6P82932 125 aaKnown RBP13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 SURF1Q15526 300 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 PTGISQ16647 500 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 SERINC5Q86VE9 423 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 GLYCTKQ8IVS8 523 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 NME8Q8N427 588 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 LNX1Q8TBB1 728 aaPredicted RBP13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 SHC3Q92529 594 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 ACAP3Q96P50 834 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 OSBPL7Q9BZF2 842 aa13.13□□□□□ -0.31
SPTBN1-203ENST00000389980 TRMT13Q9NUP7 481 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms