RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 DTNBP1Q96EV8 351 aa15.09■□□□□ 0.01
RTF1-201ENST00000389629 FAM81BQ96LP2 452 aa15.09■□□□□ 0.01
RTF1-201ENST00000389629 MAGEB18Q96M61 343 aa15.09■□□□□ 0.01
RTF1-201ENST00000389629 RPS6KC1Q96S38 1066 aa15.09■□□□□ 0.01
RTF1-201ENST00000389629 MOV10L1Q9BXT6 1211 aaKnown RBP15.09■□□□□ 0.01
RTF1-201ENST00000389629 MIS12Q9H081 205 aa15.09■□□□□ 0.01
RTF1-201ENST00000389629 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.08■□□□□ 0.01
RTF1-201ENST00000389629 TLR3O15455 904 aaKnown RBP15.08■□□□□ 0.01
RTF1-201ENST00000389629 ACADSP16219 412 aa15.08■□□□□ 0.01
RTF1-201ENST00000389629 EIF2AK2P19525 551 aaKnown RBP15.08■□□□□ 0.01
RTF1-201ENST00000389629 SNX30Q5VWJ9 437 aa15.08■□□□□ 0.01
RTF1-201ENST00000389629 TMEM270Q6UE05 265 aa15.08■□□□□ 0.01
RTF1-201ENST00000389629 CPA5Q8WXQ8 436 aa15.08■□□□□ 0.01
RTF1-201ENST00000389629 NSL1Q96IY1 281 aa15.08■□□□□ 0.01
RTF1-201ENST00000389629 SEPT10Q9P0V9 454 aa15.08■□□□□ 0.01
RTF1-201ENST00000389629 CTNNAL1Q9UBT7 734 aa15.08■□□□□ 0.01
RTF1-201ENST00000389629 POLR2BP30876 1174 aaKnown RBP15.08■□□□□ 0
RTF1-201ENST00000389629 POLGP54098 1239 aaPredicted RBP15.08■□□□□ 0
RTF1-201ENST00000389629 GSCP56915 257 aaPredicted RBP15.08■□□□□ 0
RTF1-201ENST00000389629 PPP4CP60510 307 aa15.08■□□□□ 0
RTF1-201ENST00000389629 XRCC4Q13426 336 aa15.08■□□□□ 0
RTF1-201ENST00000389629 KLHL38Q2WGJ6 581 aa15.08■□□□□ 0
RTF1-201ENST00000389629 TMEM119Q4V9L6 283 aa15.08■□□□□ 0
RTF1-201ENST00000389629 AADACL2Q6P093 401 aa15.08■□□□□ 0
RTF1-201ENST00000389629 BTNL9Q6UXG8 535 aa15.08■□□□□ 0
RTF1-201ENST00000389629 HAUS6Q7Z4H7 955 aa15.08■□□□□ 0
RTF1-201ENST00000389629 RHOT1Q8IXI2 618 aa15.08■□□□□ 0
RTF1-201ENST00000389629 ARHGEF1Q92888 912 aaKnown RBP15.08■□□□□ 0
RTF1-201ENST00000389629 FAM213AQ9BRX8 229 aa15.08■□□□□ 0
RTF1-201ENST00000389629 SENP1Q9P0U3 644 aa15.08■□□□□ 0
RTF1-201ENST00000389629 FIS1Q9Y3D6 152 aa15.08■□□□□ 0
RTF1-201ENST00000389629 TLR2O60603 784 aa15.08■□□□□ 0
RTF1-201ENST00000389629 ZBED4O75132 1171 aa15.08■□□□□ 0
RTF1-201ENST00000389629 HIC1Q14526 733 aa15.08■□□□□ 0
RTF1-201ENST00000389629 DLGAP5Q15398 846 aa15.08■□□□□ 0
RTF1-201ENST00000389629 CYTH1Q15438 398 aa15.08■□□□□ 0
RTF1-201ENST00000389629 PGM2Q96G03 612 aa15.08■□□□□ 0
RTF1-201ENST00000389629 MTMR9Q96QG7 549 aa15.08■□□□□ 0
RTF1-201ENST00000389629 TMEM117Q9H0C3 514 aa15.08■□□□□ 0
RTF1-201ENST00000389629 RANBP17Q9H2T7 1088 aaKnown RBP15.08■□□□□ 0
RTF1-201ENST00000389629 ABCC6O95255 1503 aa15.08■□□□□ 0
RTF1-201ENST00000389629 HIF1AQ16665 826 aa15.08■□□□□ 0
RTF1-201ENST00000389629 LMBRD2Q68DH5 695 aaPredicted RBP15.08■□□□□ 0
RTF1-201ENST00000389629 CYFIP1Q7L576 1253 aa15.08■□□□□ 0
RTF1-201ENST00000389629 ZNF354CQ86Y25 554 aa15.08■□□□□ 0
RTF1-201ENST00000389629 ATP11CQ8NB49 1132 aa15.08■□□□□ 0
RTF1-201ENST00000389629 SLC4A9Q96Q91 983 aa15.08■□□□□ 0
RTF1-201ENST00000389629 RIOX1Q9H6W3 641 aa15.08■□□□□ 0
RTF1-201ENST00000389629 UVRAGQ9P2Y5 699 aa15.08■□□□□ 0
RTF1-201ENST00000389629 WDR64B1ANS9 1081 aa15.07■□□□□ 0
RTF1-201ENST00000389629 STK10O94804 968 aaKnown RBP15.07■□□□□ 0
RTF1-201ENST00000389629 ATP6V1B1P15313 513 aa15.07■□□□□ 0
RTF1-201ENST00000389629 KRT4P19013 534 aa15.07■□□□□ 0
RTF1-201ENST00000389629 HGSNATQ68CP4 663 aa15.07■□□□□ 0
RTF1-201ENST00000389629 RINT1Q6NUQ1 792 aa15.07■□□□□ 0
RTF1-201ENST00000389629 ANO5Q75V66 913 aa15.07■□□□□ 0
RTF1-201ENST00000389629 PCGF5Q86SE9 256 aa15.07■□□□□ 0
RTF1-201ENST00000389629 CXorf38Q8TB03 319 aa15.07■□□□□ 0
RTF1-201ENST00000389629 ACAP3Q96P50 834 aa15.07■□□□□ 0
RTF1-201ENST00000389629 COA1Q9GZY4 146 aa15.07■□□□□ 0
RTF1-201ENST00000389629 AGPAT3Q9NRZ7 376 aa15.07■□□□□ 0
RTF1-201ENST00000389629 HSPBP1Q9NZL4 362 aa15.07■□□□□ 0
RTF1-201ENST00000389629 SCINQ9Y6U3 715 aa15.07■□□□□ 0
RTF1-201ENST00000389629 RASSF9O75901 435 aa15.07■□□□□ 0
RTF1-201ENST00000389629 CALB2P22676 271 aa15.07■□□□□ 0
RTF1-201ENST00000389629 ALDH1B1P30837 517 aa15.07■□□□□ 0
RTF1-201ENST00000389629 ATP8B4Q8TF62 1192 aa15.07■□□□□ 0
RTF1-201ENST00000389629 CDKL2Q92772 493 aa15.07■□□□□ 0
RTF1-201ENST00000389629 SHCBP1LQ9BZQ2 653 aa15.07■□□□□ 0
RTF1-201ENST00000389629 MYLK2Q9H1R3 596 aa15.07■□□□□ 0
RTF1-201ENST00000389629 GPR75-ASB3A0A0A6YYF3 556 aa15.07■□□□□ 0
RTF1-201ENST00000389629 DENND3A2RUS2 1198 aa15.07■□□□□ 0
RTF1-201ENST00000389629 HNRNPCL1O60812 293 aaKnown RBP15.07■□□□□ 0
RTF1-201ENST00000389629 ANKRD20A4Q4UJ75 823 aa15.07■□□□□ 0
RTF1-201ENST00000389629 ZCWPW2Q504Y3 356 aa15.07■□□□□ 0
RTF1-201ENST00000389629 MCF2L2Q86YR7 1114 aa15.07■□□□□ 0
RTF1-201ENST00000389629 FBXL13Q8NEE6 735 aa15.07■□□□□ 0
RTF1-201ENST00000389629 STK32AQ8WU08 396 aa15.07■□□□□ 0
RTF1-201ENST00000389629 FAF2Q96CS3 445 aa15.07■□□□□ 0
RTF1-201ENST00000389629 ARHGEF26Q96DR7 871 aa15.07■□□□□ 0
RTF1-201ENST00000389629 RBM41Q96IZ5 413 aaKnown RBP15.07■□□□□ 0
RTF1-201ENST00000389629 LGR5O75473 907 aa15.07■□□□□ 0
RTF1-201ENST00000389629 ART3Q13508 389 aa15.07■□□□□ 0
RTF1-201ENST00000389629 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.07■□□□□ 0
RTF1-201ENST00000389629 SLC35C1Q96A29 364 aa15.07■□□□□ 0
RTF1-201ENST00000389629 MKNK1Q9BUB5 465 aa15.07■□□□□ 0
RTF1-201ENST00000389629 DNAI2Q9GZS0 605 aa15.07■□□□□ 0
RTF1-201ENST00000389629 TUFT1Q9NNX1 390 aa15.07■□□□□ 0
RTF1-201ENST00000389629 PDP2Q9P2J9 529 aa15.07■□□□□ 0
RTF1-201ENST00000389629 CHMP2BQ9UQN3 213 aa15.07■□□□□ 0
RTF1-201ENST00000389629 NAALADL1Q9UQQ1 740 aa15.07■□□□□ 0
RTF1-201ENST00000389629 TBX3O15119 743 aa15.06■□□□□ 0
RTF1-201ENST00000389629 CRKP46108 304 aa15.06■□□□□ 0
RTF1-201ENST00000389629 CASP5P51878 434 aa15.06■□□□□ 0
RTF1-201ENST00000389629 COG2Q14746 738 aa15.06■□□□□ 0
RTF1-201ENST00000389629 C2CD6Q53TS8 623 aa15.06■□□□□ 0
RTF1-201ENST00000389629 AGR3Q8TD06 166 aa15.06■□□□□ 0
RTF1-201ENST00000389629 HSPH1Q92598 858 aa15.06■□□□□ 0
RTF1-201ENST00000389629 NMD3Q96D46 503 aaKnown RBP15.06■□□□□ 0
RTF1-201ENST00000389629 ZCWPW1Q9H0M4 648 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms