RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 SLC12A6Q9UHW9 1150 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 TTC7AQ9ULT0 858 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 HNRNPDLO14979 420 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 CLDN3O15551 220 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 CAPN15O75808 1086 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 KCNA3P22001 575 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 PTGIRP43119 386 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 PEX5P50542 639 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 WNT7BP56706 349 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 PPP2R2AP63151 447 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 MTMR3Q13615 1198 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 KRT39Q6A163 491 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 SPOPLQ6IQ16 392 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 RUFY4Q6ZNE9 571 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 SV2AQ7L0J3 742 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 TRIM42Q8IWZ5 723 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 SELENOSQ9BQE4 189 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 RNF146Q9NTX7 359 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 TBC1D22BQ9NU19 505 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 PPP1R1BQ9UD71 204 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 hCG_2014768A0A024R1R8 64 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 PHF2O75151 1096 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 RARAP10276 462 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 PAPOLAP51003 745 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 PMS2P54278 862 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 NCKAP1LP55160 1127 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 SLC29A2Q14542 456 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 CCDC38Q502W7 563 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 SPATA21Q7Z572 469 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 PASD1Q8IV76 773 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 C4orf19Q8IY42 314 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 CPA5Q8WXQ8 436 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 ATG4AQ8WYN0 398 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 TSPYL2Q9H2G4 693 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 GRHL1Q9NZI5 618 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 SEPT9Q9UHD8 586 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 L3MBTL1Q9Y468 752 aa12.5□□□□□ -0.41
RAPGEF3-201ENST00000389212 ATP8B3O60423 1300 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 GJC1P36383 396 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 VPS41P49754 854 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 PDE6CP51160 858 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 SMTNP53814 917 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 MFAP3P55082 362 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 MXRA7P84157 204 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 NBPF12Q5TAG4 269 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 NLRX1Q86UT6 975 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 SHC3Q92529 594 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 RAPGEF5Q92565 580 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 TEPSINQ96N21 525 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 NT5C1BQ96P26 610 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 NAP1L3Q99457 506 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 CCDC113Q9H0I3 377 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 AZI2Q9H6S1 392 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 RAB20Q9NX57 234 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 SYNGAP1Q96PV0 1343 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 FOXO6A8MYZ6 492 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 RFX1P22670 979 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 IFI35P80217 286 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 MYBPC2Q14324 1141 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 SCARA3Q6AZY7 606 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 C11orf63Q6NUN7 778 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 EIF1ADQ8N9N8 165 aaKnown RBP12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 EPS8L3Q8TE67 593 aaKnown RBP12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 CYFIP2Q96F07 1278 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 EPAS1Q99814 870 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 YIPF2Q9BWQ6 316 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 O00370 1275 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 CFHP08603 1231 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 ACOT2P49753 483 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 ALCAMQ13740 583 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 MTERF2Q49AM1 385 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 SEZ6Q53EL9 994 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 CCDC50Q8IVM0 306 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 FBXL13Q8NEE6 735 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 HERPUD2Q9BSE4 406 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 ANAPC7Q9UJX3 599 aa12.49□□□□□ -0.41
RAPGEF3-201ENST00000389212 A0A1B0GVG6 124 aa12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 ATP6V1G1O75348 118 aa12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 GJB6O95452 261 aa12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 NR3C2P08235 984 aa12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 HARSP12081 509 aaKnown RBP12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 HMGB2P26583 209 aaKnown RBP12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 SPRED3Q2MJR0 410 aa12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 DENND2CQ68D51 928 aa12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 SNRNP48Q6IEG0 339 aaKnown RBP12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 SLC13A5Q86YT5 568 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 MAP4K3Q8IVH8 894 aa12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 C12orf56Q8IXR9 622 aa12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 ARFGAP2Q8N6H7 521 aa12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 TXLNGYQ9BZA5 131 aa12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 MAF1Q9H063 256 aa12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 DEFB129Q9H1M3 183 aa12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 PCNTO95613 3336 aa12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 VWA5AO00534 786 aa12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 P4HA2O15460 535 aa12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 ZBED4O75132 1171 aa12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 FAM107AO95990 144 aa12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 MAPTP10636 758 aaKnown RBP12.48□□□□□ -0.41
RAPGEF3-201ENST00000389212 BIRC3Q13489 604 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms