RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 POLR3FQ9H1D9 316 aaPredicted RBP23.62■■□□□ 1.37
CNEP1R1-201ENST00000389134 SNTG2Q9NY99 539 aa23.62■■□□□ 1.37
CNEP1R1-201ENST00000389134 PDCD11Q14690 1871 aaKnown RBP23.62■■□□□ 1.37
CNEP1R1-201ENST00000389134 SHISA7A6NL88 538 aa23.61■■□□□ 1.37
CNEP1R1-201ENST00000389134 SLC30A4O14863 429 aa23.61■■□□□ 1.37
CNEP1R1-201ENST00000389134 N4BP3O15049 544 aa23.61■■□□□ 1.37
CNEP1R1-201ENST00000389134 TOB2Q14106 344 aaPredicted RBP23.61■■□□□ 1.37
CNEP1R1-201ENST00000389134 NAB2Q15742 525 aa23.61■■□□□ 1.37
CNEP1R1-201ENST00000389134 FAM187BQ17R55 369 aa23.61■■□□□ 1.37
CNEP1R1-201ENST00000389134 PIK3AP1Q6ZUJ8 805 aa23.61■■□□□ 1.37
CNEP1R1-201ENST00000389134 RUFY3Q7L099 469 aa23.61■■□□□ 1.37
CNEP1R1-201ENST00000389134 BACE2Q9Y5Z0 518 aa23.61■■□□□ 1.37
CNEP1R1-201ENST00000389134 CDY1Q9Y6F8 540 aa23.61■■□□□ 1.37
CNEP1R1-201ENST00000389134 LRRIQ4A6NIV6 560 aa23.6■■□□□ 1.37
CNEP1R1-201ENST00000389134 TMEM189-UBE2V1I3L0A0 370 aa23.6■■□□□ 1.37
CNEP1R1-201ENST00000389134 RECQL4O94761 1208 aa23.6■■□□□ 1.37
CNEP1R1-201ENST00000389134 RETP07949 1114 aa23.6■■□□□ 1.37
CNEP1R1-201ENST00000389134 PTPN2P17706 415 aa23.6■■□□□ 1.37
CNEP1R1-201ENST00000389134 XBP1P17861 261 aa23.6■■□□□ 1.37
CNEP1R1-201ENST00000389134 RARRES1P49788 294 aa23.6■■□□□ 1.37
CNEP1R1-201ENST00000389134 SLC5A9Q2M3M2 681 aa23.6■■□□□ 1.37
CNEP1R1-201ENST00000389134 PPM1JQ5JR12 505 aa23.6■■□□□ 1.37
CNEP1R1-201ENST00000389134 ZNF687Q8N1G0 1237 aa23.6■■□□□ 1.37
CNEP1R1-201ENST00000389134 FZD8Q9H461 694 aa23.6■■□□□ 1.37
CNEP1R1-201ENST00000389134 BRD9Q9H8M2 597 aa23.6■■□□□ 1.37
CNEP1R1-201ENST00000389134 NDRG2Q9UN36 371 aaKnown RBP23.6■■□□□ 1.37
CNEP1R1-201ENST00000389134 RBM25P49756 843 aaKnown RBP23.59■■□□□ 1.37
CNEP1R1-201ENST00000389134 CCR3P51677 355 aa23.59■■□□□ 1.37
CNEP1R1-201ENST00000389134 ANKS3Q6ZW76 656 aa23.59■■□□□ 1.37
CNEP1R1-201ENST00000389134 ZBTB8OSQ8IWT0 167 aa23.59■■□□□ 1.37
CNEP1R1-201ENST00000389134 CHAMP1Q96JM3 812 aa23.59■■□□□ 1.37
CNEP1R1-201ENST00000389134 PDZD7Q9H5P4 517 aa23.59■■□□□ 1.37
CNEP1R1-201ENST00000389134 ZFP14Q9HCL3 533 aa23.59■■□□□ 1.37
CNEP1R1-201ENST00000389134 DAXXQ9UER7 740 aaPredicted RBP23.59■■□□□ 1.37
CNEP1R1-201ENST00000389134 PCDHA12Q9UN75 941 aa23.59■■□□□ 1.37
CNEP1R1-201ENST00000389134 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.59■■□□□ 1.37
CNEP1R1-201ENST00000389134 ZFHX4Q86UP3 3567 aa23.58■■□□□ 1.37
CNEP1R1-201ENST00000389134 ARHGEF37A1IGU5 675 aa23.58■■□□□ 1.37
CNEP1R1-201ENST00000389134 B3GAT3O94766 335 aa23.58■■□□□ 1.37
CNEP1R1-201ENST00000389134 XRCC6P12956 609 aaKnown RBP eCLIP23.58■■□□□ 1.37
CNEP1R1-201ENST00000389134 CEBPBP17676 345 aa23.58■■□□□ 1.37
CNEP1R1-201ENST00000389134 LPAL2Q16609 132 aa23.58■■□□□ 1.37
CNEP1R1-201ENST00000389134 TMEM132AQ24JP5 1023 aa23.58■■□□□ 1.37
CNEP1R1-201ENST00000389134 CDCA2Q69YH5 1023 aaPredicted RBP23.58■■□□□ 1.37
CNEP1R1-201ENST00000389134 IRF7Q92985 503 aa23.58■■□□□ 1.37
CNEP1R1-201ENST00000389134 ADPGKQ9BRR6 497 aa23.58■■□□□ 1.37
CNEP1R1-201ENST00000389134 TRMT61BQ9BVS5 477 aaKnown RBP23.58■■□□□ 1.37
CNEP1R1-201ENST00000389134 COL4A2P08572 1712 aa23.58■■□□□ 1.37
CNEP1R1-201ENST00000389134 CITO14578 2027 aa23.57■■□□□ 1.36
CNEP1R1-201ENST00000389134 GREB1Q4ZG55 1949 aa23.57■■□□□ 1.36
CNEP1R1-201ENST00000389134 ZNF197O14709 1029 aa23.57■■□□□ 1.36
CNEP1R1-201ENST00000389134 TRAPPC3O43617 180 aa23.57■■□□□ 1.36
CNEP1R1-201ENST00000389134 MICAL2O94851 1124 aa23.57■■□□□ 1.36
CNEP1R1-201ENST00000389134 LRG1P02750 347 aa23.57■■□□□ 1.36
CNEP1R1-201ENST00000389134 POTEHQ6S545 545 aa23.57■■□□□ 1.36
CNEP1R1-201ENST00000389134 PRR23BQ6ZRT6 265 aa23.57■■□□□ 1.36
CNEP1R1-201ENST00000389134 ZNF461Q8TAF7 563 aa23.57■■□□□ 1.36
CNEP1R1-201ENST00000389134 FAM3CQ92520 227 aa23.57■■□□□ 1.36
CNEP1R1-201ENST00000389134 C2orf40Q9H1Z8 148 aa23.57■■□□□ 1.36
CNEP1R1-201ENST00000389134 CXCL16Q9H2A7 254 aa23.57■■□□□ 1.36
CNEP1R1-201ENST00000389134 LMAN1LQ9HAT1 526 aa23.57■■□□□ 1.36
CNEP1R1-201ENST00000389134 ZSWIM6Q9HCJ5 1215 aa23.57■■□□□ 1.36
CNEP1R1-201ENST00000389134 TRPV5Q9NQA5 729 aa23.57■■□□□ 1.36
CNEP1R1-201ENST00000389134 FAM208BQ5VWN6 2430 aa23.57■■□□□ 1.36
CNEP1R1-201ENST00000389134 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.56■■□□□ 1.36
CNEP1R1-201ENST00000389134 USO1O60763 962 aaKnown RBP23.56■■□□□ 1.36
CNEP1R1-201ENST00000389134 CDKL5O76039 1030 aa23.56■■□□□ 1.36
CNEP1R1-201ENST00000389134 FCARP24071 287 aa23.56■■□□□ 1.36
CNEP1R1-201ENST00000389134 ELF1P32519 619 aa23.56■■□□□ 1.36
CNEP1R1-201ENST00000389134 STK3Q13188 491 aa23.56■■□□□ 1.36
CNEP1R1-201ENST00000389134 PRPF4BQ13523 1007 aaKnown RBP23.56■■□□□ 1.36
CNEP1R1-201ENST00000389134 SKAP1Q86WV1 359 aa23.56■■□□□ 1.36
CNEP1R1-201ENST00000389134 NOSTRINQ8IVI9 506 aa23.56■■□□□ 1.36
CNEP1R1-201ENST00000389134 MCPH1Q8NEM0 835 aa23.56■■□□□ 1.36
CNEP1R1-201ENST00000389134 PIGOQ8TEQ8 1089 aa23.56■■□□□ 1.36
CNEP1R1-201ENST00000389134 SEMA4GQ9NTN9 838 aa23.56■■□□□ 1.36
CNEP1R1-201ENST00000389134 TTLL13PA6NNM8 815 aa23.55■■□□□ 1.36
CNEP1R1-201ENST00000389134 FOXD2O60548 495 aaPredicted RBP23.55■■□□□ 1.36
CNEP1R1-201ENST00000389134 TKTP29401 623 aaKnown RBP23.55■■□□□ 1.36
CNEP1R1-201ENST00000389134 CXCL12P48061 93 aa23.55■■□□□ 1.36
CNEP1R1-201ENST00000389134 GRM2Q14416 872 aa23.55■■□□□ 1.36
CNEP1R1-201ENST00000389134 MAPK6Q16659 721 aa23.55■■□□□ 1.36
CNEP1R1-201ENST00000389134 FAM78AQ5JUQ0 283 aa23.55■■□□□ 1.36
CNEP1R1-201ENST00000389134 PRSS36Q5K4E3 855 aa23.55■■□□□ 1.36
CNEP1R1-201ENST00000389134 MAEAQ7L5Y9 396 aa23.55■■□□□ 1.36
CNEP1R1-201ENST00000389134 OXER1Q8TDS5 423 aa23.55■■□□□ 1.36
CNEP1R1-201ENST00000389134 DDX27Q96GQ7 796 aaKnown RBP23.55■■□□□ 1.36
CNEP1R1-201ENST00000389134 UROC1Q96N76 676 aa23.55■■□□□ 1.36
CNEP1R1-201ENST00000389134 ZNF334Q9HCZ1 680 aaPredicted RBP23.55■■□□□ 1.36
CNEP1R1-201ENST00000389134 GPRC5CQ9NQ84 441 aa23.55■■□□□ 1.36
CNEP1R1-201ENST00000389134 CYP46A1Q9Y6A2 500 aa23.55■■□□□ 1.36
CNEP1R1-201ENST00000389134 PRRG1O14668 218 aa23.54■■□□□ 1.36
CNEP1R1-201ENST00000389134 ABLIM3O94929 683 aa23.54■■□□□ 1.36
CNEP1R1-201ENST00000389134 CLCNKBP51801 687 aa23.54■■□□□ 1.36
CNEP1R1-201ENST00000389134 SIM2Q14190 667 aaPredicted RBP23.54■■□□□ 1.36
CNEP1R1-201ENST00000389134 CSRP2Q16527 193 aa23.54■■□□□ 1.36
CNEP1R1-201ENST00000389134 CALCRLQ16602 461 aa23.54■■□□□ 1.36
CNEP1R1-201ENST00000389134 SLC8B1Q6J4K2 584 aa23.54■■□□□ 1.36
CNEP1R1-201ENST00000389134 PRR23CQ6ZRP0 262 aa23.54■■□□□ 1.36
CNEP1R1-201ENST00000389134 MAP4K3Q8IVH8 894 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms