RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 SKIDA1Q1XH10 827 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 KRT71Q3SY84 523 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 WDR44Q5JSH3 913 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 HOOK3Q86VS8 718 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 MCOLN2Q8IZK6 566 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 MTRF1LQ9UGC7 380 aaKnown RBP16■□□□□ 0.15
SCFD2-201ENST00000388940 GGA2Q9UJY4 613 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 NOVA2Q9UNW9 492 aaKnown RBP16■□□□□ 0.15
SCFD2-201ENST00000388940 FAM107AO95990 144 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 PAEPP09466 180 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 ATP4AP20648 1035 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 NAMPTP43490 491 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 IFFO1Q0D2I5 559 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 STRN3Q13033 797 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 MTERF2Q49AM1 385 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 NOL9Q5SY16 702 aaKnown RBP16■□□□□ 0.15
SCFD2-201ENST00000388940 SLFN12LQ6IEE8 588 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 CROCCP2Q86T23 111 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 NLRP14Q86W24 1093 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 DNERQ8NFT8 737 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 KLRG1Q96E93 195 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 PI4K2AQ9BTU6 479 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 PORCNQ9H237 461 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 RABEP2Q9H5N1 569 aa16■□□□□ 0.15
SCFD2-201ENST00000388940 DHX33Q9H6R0 707 aaKnown RBP16■□□□□ 0.15
SCFD2-201ENST00000388940 TCRBV7S2A1N4TA0A589 114 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 LDHAP00338 332 aaKnown RBP15.99■□□□□ 0.15
SCFD2-201ENST00000388940 CYP1A1P04798 512 aaPredicted RBP15.99■□□□□ 0.15
SCFD2-201ENST00000388940 POLGP54098 1239 aaPredicted RBP15.99■□□□□ 0.15
SCFD2-201ENST00000388940 STXBP2Q15833 593 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 KCTD19Q17RG1 926 aaPredicted RBP15.99■□□□□ 0.15
SCFD2-201ENST00000388940 DEFB132Q7Z7B7 95 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 CPNE8Q86YQ8 564 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 MYCBPAPQ8TBZ2 947 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 ZNF473Q8WTR7 871 aaKnown RBP15.99■□□□□ 0.15
SCFD2-201ENST00000388940 PPM1EQ8WY54 764 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 ART4Q93070 314 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 FNBP1Q96RU3 617 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 CCT8L2Q96SF2 557 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 TMEM109Q9BVC6 243 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 NIFKQ9BYG3 293 aaKnown RBP15.99■□□□□ 0.15
SCFD2-201ENST00000388940 BCCIPQ9P287 314 aaKnown RBP eCLIP15.99■□□□□ 0.15
SCFD2-201ENST00000388940 AGO2Q9UKV8 859 aaKnown RBP15.99■□□□□ 0.15
SCFD2-201ENST00000388940 GJA3Q9Y6H8 435 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 PASKQ96RG2 1323 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 SPDYE16A6NNV3 312 aaPredicted RBP15.99■□□□□ 0.15
SCFD2-201ENST00000388940 HLA-DRAP01903 254 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 OATP04181 439 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 MAPK4P31152 587 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 ARL2P36404 184 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 SP2Q02086 613 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 CENPCQ03188 943 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 BYSLQ13895 437 aaKnown RBP15.99■□□□□ 0.15
SCFD2-201ENST00000388940 ODF2Q5BJF6 829 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 CCDC105Q8IYK2 499 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 CHST13Q8NET6 341 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 MAIP1Q8WWC4 291 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 PGM2Q96G03 612 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 CNOT10Q9H9A5 744 aaKnown RBP15.99■□□□□ 0.15
SCFD2-201ENST00000388940 ZNF302Q9NR11 478 aa15.99■□□□□ 0.15
SCFD2-201ENST00000388940 IGKV6D-21A0A0A0MT36 114 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 MAGOHP61326 146 aaKnown RBP15.98■□□□□ 0.15
SCFD2-201ENST00000388940 SP4Q02446 784 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 PTP4A2Q12974 167 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 SLMAPQ14BN4 828 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 SH3D19Q5HYK7 790 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 TDRD10Q5VZ19 366 aaKnown RBP15.98■□□□□ 0.15
SCFD2-201ENST00000388940 DENND2CQ68D51 928 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 CRELD2Q6UXH1 353 aaPredicted RBP15.98■□□□□ 0.15
SCFD2-201ENST00000388940 TRIM72Q6ZMU5 477 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 MICALCLQ6ZW33 695 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 RNF25Q96BH1 459 aaPredicted RBP15.98■□□□□ 0.15
SCFD2-201ENST00000388940 CEP89Q96ST8 783 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 ANAPC7Q9UJX3 599 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 AFG3L2Q9Y4W6 797 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 WDR90Q96KV7 1748 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 MROH7Q68CQ1 1323 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 CLGNO14967 610 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 CPP00450 1065 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 TNNI1P19237 187 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 ACO1P21399 889 aaKnown RBP15.98■□□□□ 0.15
SCFD2-201ENST00000388940 GLRA2P23416 452 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 NLRP11P59045 1033 aaKnown RBP15.98■□□□□ 0.15
SCFD2-201ENST00000388940 ANGEL2Q5VTE6 544 aaKnown RBP15.98■□□□□ 0.15
SCFD2-201ENST00000388940 YTHDF3Q7Z739 585 aaKnown RBP15.98■□□□□ 0.15
SCFD2-201ENST00000388940 ASAP3Q8TDY4 903 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 CENPTQ96BT3 561 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 TMEM134Q9H6X4 195 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 CNTN6Q9UQ52 1028 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 PPP2R3BQ9Y5P8 575 aa15.98■□□□□ 0.15
SCFD2-201ENST00000388940 GMNCA6NCL1 334 aa15.97■□□□□ 0.15
SCFD2-201ENST00000388940 K7ERI5 159 aa15.97■□□□□ 0.15
SCFD2-201ENST00000388940 TRAPPC3O43617 180 aa15.97■□□□□ 0.15
SCFD2-201ENST00000388940 VNN1O95497 513 aa15.97■□□□□ 0.15
SCFD2-201ENST00000388940 ECEL1O95672 775 aa15.97■□□□□ 0.15
SCFD2-201ENST00000388940 RARGP13631 454 aa15.97■□□□□ 0.15
SCFD2-201ENST00000388940 SEC24CP53992 1094 aa15.97■□□□□ 0.15
SCFD2-201ENST00000388940 PPP1R2P3Q6NXS1 205 aa15.97■□□□□ 0.15
SCFD2-201ENST00000388940 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.97■□□□□ 0.15
SCFD2-201ENST00000388940 DEPTORQ8TB45 409 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms