RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 ATXN3P54252 364 aaPredicted RBP13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 WASHC5Q12768 1159 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 BARGINQ6ZT62 677 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 PIGSQ96S52 555 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 RNF17Q9BXT8 1623 aaKnown RBP13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 MYO1DO94832 1006 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 MTHFD1LQ6UB35 978 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 METTL23Q86XA0 190 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 MDM1Q8TC05 714 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 VPS50Q96JG6 964 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 PNKPQ96T60 521 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 AKT3Q9Y243 479 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 MYO1GB0I1T2 1018 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 LDHAP00338 332 aaKnown RBP13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 GNL1P36915 607 aaPredicted RBP13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 RRM2BQ7LG56 351 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 SIRT2Q8IXJ6 389 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 ST13P5Q8NFI4 369 aaPredicted RBP13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 SLC35G2Q8TBE7 412 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 OTULINQ96BN8 352 aa13.05□□□□□ -0.32
SRGAP3-202ENST00000383836 CALB2P22676 271 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 ADARP55265 1226 aaKnown RBP13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 CSTF3Q12996 717 aaKnown RBP13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 PTK7Q13308 1070 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 ARHGEF6Q15052 776 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 ITPRIPL1Q6GPH6 555 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 MSTO1Q9BUK6 570 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 PUS7LQ9H0K6 701 aaKnown RBP13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 RPF1Q9H9Y2 349 aaKnown RBP13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 AS3MTQ9HBK9 375 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 MAP3K4Q9Y6R4 1608 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 CHD2O14647 1828 aaKnown RBP13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 GYS1P13807 737 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 SERPINB9P50453 376 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 ORC2Q13416 577 aaPredicted RBP13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 CCDC81Q6ZN84 652 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 LPCAT2Q7L5N7 544 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 ATXN7L3BQ96GX2 97 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 MLH3Q9UHC1 1453 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 PRDM4Q9UKN5 801 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 C15orf41Q9Y2V0 281 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 PLEKHG2Q9H7P9 1386 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 TBKBP1A7MCY6 615 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 ATP1A4Q13733 1029 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 CCDC60Q8IWA6 550 aaPredicted RBP13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 TRIM10Q9UDY6 481 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 GOLGA8JA6NMD2 632 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 PPIP5K2O43314 1243 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 MYL2P10916 166 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 TP53BP2Q13625 1128 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 OLFML1Q6UWY5 402 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 CCDC149Q6ZUS6 474 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 IFT43Q96FT9 208 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 BFARQ9NZS9 450 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 TRIM24O15164 1050 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 TSC22D2O75157 780 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 GNA15P30679 374 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 AARS2Q5JTZ9 985 aaKnown RBP13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 FRMD5Q7Z6J6 570 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 XXYLT1Q8NBI6 393 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 XPO7Q9UIA9 1087 aaKnown RBP13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 SSU72P8A0A1W2PR75 194 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 GOLGA8TH3BQL2 631 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 KCNA2P16389 499 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 SLC29A2Q14542 456 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 LRRC34Q8IZ02 419 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 RNF139Q8WU17 664 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 FAM162AQ96A26 154 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 ZNF496Q96IT1 587 aaPredicted RBP13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 FAM32AQ9Y421 112 aaKnown RBP13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 PDAP1Q13442 181 aaKnown RBP13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 ABCB5Q2M3G0 1257 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 BHMT2Q9H2M3 363 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 KIAA1586Q9HCI6 787 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 SOX13Q9UN79 622 aa13.04□□□□□ -0.32
SRGAP3-202ENST00000383836 SETBP1Q9Y6X0 1596 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 MYO3BQ8WXR4 1341 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 PNMA6FA0A0J9YX94 578 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 APOL1O14791 398 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 SPAG6O75602 509 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 GCLMP48507 274 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 SFSWAPQ12872 951 aaKnown RBP13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 KCNB1Q14721 858 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 TRIP4Q15650 581 aaPredicted RBP13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 IZUMO2Q6UXV1 221 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 ERP44Q9BS26 406 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 GPBP1L1Q9HC44 474 aaPredicted RBP13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 HSPBP1Q9NZL4 362 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 DAPK2Q9UIK4 370 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 ZNF746Q6NUN9 644 aaPredicted RBP13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 TC2NQ8N9U0 490 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 PPHLN1Q8NEY8 458 aaKnown RBP13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 LRRC39Q96DD0 335 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 FAM193BQ96PV7 902 aaPredicted RBP13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 WDR17Q8IZU2 1322 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 RNF103O00237 685 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 VAMP7P51809 220 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 OASLQ15646 514 aaKnown RBP13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 ENOSF1Q7L5Y1 443 aa13.03□□□□□ -0.32
SRGAP3-202ENST00000383836 RCOR2Q8IZ40 523 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms