RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 C4orf32Q8N8J7 132 aa19.65■□□□□ 0.74
RPUSD3-201ENST00000383820 ITFG1Q8TB96 612 aa19.65■□□□□ 0.74
RPUSD3-201ENST00000383820 DDX27Q96GQ7 796 aaKnown RBP19.65■□□□□ 0.74
RPUSD3-201ENST00000383820 DDX23Q9BUQ8 820 aaKnown RBP19.65■□□□□ 0.74
RPUSD3-201ENST00000383820 CCDC94Q9BW85 323 aaPredicted RBP19.65■□□□□ 0.74
RPUSD3-201ENST00000383820 RAB34Q9BZG1 259 aa19.65■□□□□ 0.74
RPUSD3-201ENST00000383820 KIAA1024Q9UPX6 916 aa19.65■□□□□ 0.74
RPUSD3-201ENST00000383820 CDY1Q9Y6F8 540 aa19.65■□□□□ 0.74
RPUSD3-201ENST00000383820 GVINP1Q7Z2Y8 2422 aa19.64■□□□□ 0.74
RPUSD3-201ENST00000383820 SMIM28A0A1B0GU29 152 aa19.64■□□□□ 0.73
RPUSD3-201ENST00000383820 YARSP54577 528 aaKnown RBP19.64■□□□□ 0.73
RPUSD3-201ENST00000383820 GNL2Q13823 731 aaKnown RBP19.64■□□□□ 0.73
RPUSD3-201ENST00000383820 PABPC1LQ4VXU2 614 aaKnown RBP19.64■□□□□ 0.73
RPUSD3-201ENST00000383820 CD300LGQ6UXG3 332 aa19.64■□□□□ 0.73
RPUSD3-201ENST00000383820 ALKAL1Q6UXT8 129 aa19.64■□□□□ 0.73
RPUSD3-201ENST00000383820 RSPO2Q6UXX9 243 aaPredicted RBP19.64■□□□□ 0.73
RPUSD3-201ENST00000383820 KCNG4Q8TDN1 519 aa19.64■□□□□ 0.73
RPUSD3-201ENST00000383820 OSBPL6Q9BZF3 934 aa19.64■□□□□ 0.73
RPUSD3-201ENST00000383820 TMEM134Q9H6X4 195 aa19.64■□□□□ 0.73
RPUSD3-201ENST00000383820 AVENQ9NQS1 362 aaPredicted RBP19.64■□□□□ 0.73
RPUSD3-201ENST00000383820 SLC38A7Q9NVC3 462 aa19.64■□□□□ 0.73
RPUSD3-201ENST00000383820 PPP4R2Q9NY27 417 aa19.64■□□□□ 0.73
RPUSD3-201ENST00000383820 DNMT3BQ9UBC3 853 aaKnown RBP19.64■□□□□ 0.73
RPUSD3-201ENST00000383820 TRIP11Q15643 1979 aa19.64■□□□□ 0.73
RPUSD3-201ENST00000383820 VPS13AQ96RL7 3174 aa19.64■□□□□ 0.73
RPUSD3-201ENST00000383820 FANCMQ8IYD8 2048 aa19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 NOTCH4Q99466 2003 aa19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 KANSL1LA0AUZ9 987 aa19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 SP9P0CG40 484 aa19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 TKTP29401 623 aaKnown RBP19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 ID4P47928 161 aa19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 MLF2Q15773 248 aaPredicted RBP19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 NPAS3Q8IXF0 933 aa19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 IGSF22Q8N9C0 903 aa19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 ST13P5Q8NFI4 369 aaPredicted RBP19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 BORCS6Q96GS4 357 aa19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 ZSCAN31Q96LW9 406 aaPredicted RBP19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 ACO2Q99798 780 aaKnown RBP19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 FOXQ1Q9C009 403 aa19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 CDT1Q9H211 546 aa19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 PTPRHQ9HD43 1115 aa19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 DDX19AQ9NUU7 478 aaKnown RBP19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 R4GN57 208 aa19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 MIA3Q5JRA6 1907 aa19.63■□□□□ 0.73
RPUSD3-201ENST00000383820 MAGEA9P43362 315 aa19.62■□□□□ 0.73
RPUSD3-201ENST00000383820 NPTX2P47972 431 aa19.62■□□□□ 0.73
RPUSD3-201ENST00000383820 SNW1Q13573 536 aaKnown RBP19.62■□□□□ 0.73
RPUSD3-201ENST00000383820 SLC44A4Q53GD3 710 aa19.62■□□□□ 0.73
RPUSD3-201ENST00000383820 SLC8B1Q6J4K2 584 aa19.62■□□□□ 0.73
RPUSD3-201ENST00000383820 C3orf58Q8NDZ4 430 aa19.62■□□□□ 0.73
RPUSD3-201ENST00000383820 ZNF461Q8TAF7 563 aa19.62■□□□□ 0.73
RPUSD3-201ENST00000383820 SNX29Q8TEQ0 813 aa19.62■□□□□ 0.73
RPUSD3-201ENST00000383820 MRPL4Q9BYD3 311 aaKnown RBP19.62■□□□□ 0.73
RPUSD3-201ENST00000383820 C17orf75Q9HAS0 396 aa19.62■□□□□ 0.73
RPUSD3-201ENST00000383820 GOLGA2P5Q9HBQ8 144 aa19.62■□□□□ 0.73
RPUSD3-201ENST00000383820 POLD4Q9HCU8 107 aa19.62■□□□□ 0.73
RPUSD3-201ENST00000383820 HCFC1R1Q9NWW0 138 aa19.62■□□□□ 0.73
RPUSD3-201ENST00000383820 GDE1Q9NZC3 331 aa19.62■□□□□ 0.73
RPUSD3-201ENST00000383820 DNM3Q9UQ16 869 aa19.62■□□□□ 0.73
RPUSD3-201ENST00000383820 MRPS23Q9Y3D9 190 aaKnown RBP19.62■□□□□ 0.73
RPUSD3-201ENST00000383820 RBM19Q9Y4C8 960 aaKnown RBP19.62■□□□□ 0.73
RPUSD3-201ENST00000383820 DMDP11532 3685 aa19.62■□□□□ 0.73
RPUSD3-201ENST00000383820 ARHGEF37A1IGU5 675 aa19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 CCDC169A6NNP5 214 aa19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 LAD1O00515 517 aa19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 SYN3O14994 580 aa19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 ECI2O75521 394 aa19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 MCF2P10911 925 aa19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 GLULP15104 373 aa19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 IGFBP6P24592 240 aaPredicted RBP19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 U2AF2P26368 475 aaKnown RBP eCLIP19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 BRCC3P46736 316 aa19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 PEX3P56589 373 aa19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 DMP1Q13316 513 aaPredicted RBP19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 ZNF568Q3ZCX4 644 aa19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 ERICH6BQ5W0A0 696 aa19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 CEP120Q8N960 986 aa19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 FAM184AQ8NB25 1140 aa19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 DRC1Q96MC2 740 aa19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 BCO2Q9BYV7 579 aa19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 SH2B1Q9NRF2 756 aaPredicted RBP19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 ARHGAP28Q9P2N2 729 aa19.61■□□□□ 0.73
RPUSD3-201ENST00000383820 ABLIM3O94929 683 aa19.6■□□□□ 0.73
RPUSD3-201ENST00000383820 RHOP08100 348 aa19.6■□□□□ 0.73
RPUSD3-201ENST00000383820 KCNE1P15382 129 aa19.6■□□□□ 0.73
RPUSD3-201ENST00000383820 PTPN2P17706 415 aa19.6■□□□□ 0.73
RPUSD3-201ENST00000383820 ELF1P32519 619 aa19.6■□□□□ 0.73
RPUSD3-201ENST00000383820 ROR1Q01973 937 aa19.6■□□□□ 0.73
RPUSD3-201ENST00000383820 SOX4Q06945 474 aaPredicted RBP19.6■□□□□ 0.73
RPUSD3-201ENST00000383820 PTGDRQ13258 359 aa19.6■□□□□ 0.73
RPUSD3-201ENST00000383820 ZNF528Q3MIS6 628 aa19.6■□□□□ 0.73
RPUSD3-201ENST00000383820 KRT79Q5XKE5 535 aa19.6■□□□□ 0.73
RPUSD3-201ENST00000383820 DAW1Q8N136 415 aa19.6■□□□□ 0.73
RPUSD3-201ENST00000383820 KXD1Q9BQD3 176 aa19.6■□□□□ 0.73
RPUSD3-201ENST00000383820 TIPINQ9BVW5 301 aa19.6■□□□□ 0.73
RPUSD3-201ENST00000383820 KMT5AQ9NQR1 393 aa19.6■□□□□ 0.73
RPUSD3-201ENST00000383820 FBXO4Q9UKT5 387 aa19.6■□□□□ 0.73
RPUSD3-201ENST00000383820 E9PMD0 336 aa19.59■□□□□ 0.73
RPUSD3-201ENST00000383820 H7C4K7 107 aa19.59■□□□□ 0.73
RPUSD3-201ENST00000383820 I3L4J1 428 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms