RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 GIMAP8Q8ND71 665 aaPredicted RBP6.05□□□□□ -1.44
RFC1-202ENST00000381897 POF1BQ8WVV4 589 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 LACRTQ9GZZ8 138 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 SLC39A2Q9NP94 309 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 AGPAT5Q9NUQ2 364 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 PCDHA4Q9UN74 947 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.05□□□□□ -1.44
RFC1-202ENST00000381897 KDM3AQ9Y4C1 1321 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 PVALEFA0A1B0GWK0 134 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 POTEB3A0JP26 581 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 GLI1P08151 1106 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 HMBSP08397 361 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 ZFXP17010 805 aaPredicted RBP6.05□□□□□ -1.44
RFC1-202ENST00000381897 DRD4P21917 467 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 CHRNA3P32297 505 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 SKIV2L2P42285 1042 aaKnown RBP6.05□□□□□ -1.44
RFC1-202ENST00000381897 SLC1A4P43007 532 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 LBRQ14739 615 aaKnown RBP6.05□□□□□ -1.44
RFC1-202ENST00000381897 SLC18A3Q16572 532 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 AMHR2Q16671 573 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 TMEM214Q6NUQ4 689 aaKnown RBP6.05□□□□□ -1.44
RFC1-202ENST00000381897 POTEBQ6S5H4 581 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 TRMT10CQ7L0Y3 403 aaKnown RBP6.05□□□□□ -1.44
RFC1-202ENST00000381897 ZC3H7AQ8IWR0 971 aaKnown RBP6.05□□□□□ -1.44
RFC1-202ENST00000381897 LRRC34Q8IZ02 419 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 OR8H2Q8N162 312 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.05□□□□□ -1.44
RFC1-202ENST00000381897 ZNF527Q8NB42 609 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 MTFMTQ96DP5 389 aaKnown RBP6.05□□□□□ -1.44
RFC1-202ENST00000381897 TSNARE1Q96NA8 513 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 PURBQ96QR8 312 aaKnown RBP6.05□□□□□ -1.44
RFC1-202ENST00000381897 TGS1Q96RS0 853 aaKnown RBP6.05□□□□□ -1.44
RFC1-202ENST00000381897 GORASP1Q9BQQ3 440 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 CCDC28BQ9BUN5 200 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 MKNK2Q9HBH9 465 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 RAD18Q9NS91 495 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 BCAP29Q9UHQ4 241 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 CAPN6Q9Y6Q1 641 aa6.05□□□□□ -1.44
RFC1-202ENST00000381897 MIF4GDA9UHW6 222 aaKnown RBP6.04□□□□□ -1.44
RFC1-202ENST00000381897 PDE2AO00408 941 aaPredicted RBP6.04□□□□□ -1.44
RFC1-202ENST00000381897 SNX2O60749 519 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 SMNDC1O75940 238 aaKnown RBP eCLIP6.04□□□□□ -1.441e-46■■■■■ 202.3
RFC1-202ENST00000381897 NPTXRO95502 500 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 MZF1P28698 734 aaPredicted RBP6.04□□□□□ -1.44
RFC1-202ENST00000381897 CASP1P29466 404 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 STAT1P42224 750 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 USP4Q13107 963 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 CHAF1BQ13112 559 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 Q3C1V9 767 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 ERMARDQ5T6L9 678 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 RD3Q7Z3Z2 195 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 ARID3BQ8IVW6 561 aaPredicted RBP6.04□□□□□ -1.44
RFC1-202ENST00000381897 KIRREL3Q8IZU9 778 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 NAT16Q8N8M0 369 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 PIGOQ8TEQ8 1089 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 AGAP11Q8TF27 550 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 U2AF1L4Q8WU68 220 aaKnown RBP6.04□□□□□ -1.44
RFC1-202ENST00000381897 PGM2Q96G03 612 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 MS4A14Q96JA4 679 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 NT5C3AQ9H0P0 336 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 COL15A1P39059 1388 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 MROH5Q6ZUA9 1318 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 MEIS1O00470 390 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 KCNH1O95259 989 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 TFRCP02786 760 aaKnown RBP6.04□□□□□ -1.44
RFC1-202ENST00000381897 GJA1P17302 382 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 USP11P51784 963 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 CDR2Q01850 454 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 SF3A3Q12874 501 aaKnown RBP eCLIP6.04□□□□□ -1.443e-17■■■■■ 113.7
RFC1-202ENST00000381897 ZNF444Q8N0Y2 327 aaPredicted RBP6.04□□□□□ -1.44
RFC1-202ENST00000381897 PLD6Q8N2A8 252 aaKnown RBP6.04□□□□□ -1.44
RFC1-202ENST00000381897 PLPP7Q8NBV4 271 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 SETD6Q8TBK2 473 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 HDAC7Q8WUI4 952 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 LPIN2Q92539 896 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 RMDN3Q96TC7 470 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 EYA3Q99504 573 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 PHF20Q9BVI0 1012 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 CDADC1Q9BWV3 514 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 ZNF277Q9NRM2 450 aaPredicted RBP6.04□□□□□ -1.44
RFC1-202ENST00000381897 UTP6Q9NYH9 597 aaKnown RBP6.04□□□□□ -1.44
RFC1-202ENST00000381897 DLGAP2Q9P1A6 1054 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 CNOT7Q9UIV1 285 aaKnown RBP6.04□□□□□ -1.44
RFC1-202ENST00000381897 NEDD4P46934 1319 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 TCP11X1B4DZS4 312 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 SPOPO43791 374 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 CCNT1O60563 726 aaKnown RBP6.04□□□□□ -1.44
RFC1-202ENST00000381897 MTX2O75431 263 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 NAT2P11245 290 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 ACTN1P12814 892 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 USH1GQ495M9 461 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 EPHA10Q5JZY3 1008 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 MEI1Q5TIA1 1274 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 C1orf94Q6P1W5 598 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 C6orf89Q6UWU4 347 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 IGDCC4Q8TDY8 1250 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 TP53INP1Q96A56 240 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 KIFC3Q9BVG8 833 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 DCLRE1BQ9H816 532 aa6.04□□□□□ -1.44
RFC1-202ENST00000381897 MAN1C1Q9NR34 630 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms