RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 PFDN4Q9NQP4 134 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 TMEM260Q9NX78 707 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 ZNF180Q9UJW8 692 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 CHD4Q14839 1912 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 CLDN3O15551 220 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 ANXA13P27216 316 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 DRAP1Q14919 205 aaPredicted RBP20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 PKN2Q16513 984 aaKnown RBP20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 DNAJC19Q96DA6 116 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 SNF8Q96H20 258 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 THTPAQ9BU02 230 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 PTTG2Q9NZH5 202 aa20.15■□□□□ 0.82
SMARCD1-201ENST00000381513 TRIM43BA6NCK2 446 aa20.14■□□□□ 0.82
SMARCD1-201ENST00000381513 A8MXQ7 604 aa20.14■□□□□ 0.82
SMARCD1-201ENST00000381513 ZFXP17010 805 aaPredicted RBP20.14■□□□□ 0.82
SMARCD1-201ENST00000381513 ITIH2P19823 946 aa20.14■□□□□ 0.82
SMARCD1-201ENST00000381513 BTKQ06187 659 aa20.14■□□□□ 0.82
SMARCD1-201ENST00000381513 STAT4Q14765 748 aa20.14■□□□□ 0.82
SMARCD1-201ENST00000381513 MMEL1Q495T6 779 aa20.14■□□□□ 0.82
SMARCD1-201ENST00000381513 HSPBAP1Q96EW2 488 aa20.14■□□□□ 0.82
SMARCD1-201ENST00000381513 TRIM55Q9BYV6 548 aa20.14■□□□□ 0.82
SMARCD1-201ENST00000381513 WHRNQ9P202 907 aa20.14■□□□□ 0.82
SMARCD1-201ENST00000381513 C2orf71A6NGG8 1288 aa20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 E9PMD0 336 aa20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 ZNF862O60290 1169 aa20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 TDP2O95551 362 aa20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 ALOX15P16050 662 aaPredicted RBP20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 TFAP4Q01664 338 aa20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 RIPOR1Q6ZS17 1223 aa20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 ACAD11Q709F0 780 aa20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 RAPH1Q70E73 1250 aa20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 GPBP1Q86WP2 473 aa20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 LRRC6Q86X45 466 aa20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 NCANO14594 1321 aa20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 ALAS1P13196 640 aa20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 SOX5P35711 763 aa20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 DCTN2Q13561 401 aaKnown RBP20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 TTC7BQ86TV6 843 aa20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 CCDC110Q8TBZ0 833 aa20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 LGALS13Q9UHV8 139 aa20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 PPM1HQ9ULR3 514 aa20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 FAF1Q9UNN5 650 aaPredicted RBP20.14■□□□□ 0.81
SMARCD1-201ENST00000381513 ANKRD62A6NC57 917 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 CLIC2O15247 247 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 CYTH3O43739 400 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 ADAMTS2O95450 1211 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 ATP6V1B1P15313 513 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 CYP11B2P19099 503 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 MARSP56192 900 aaKnown RBP20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 RASA3Q14644 834 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 TRABD2AQ86V40 505 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 CPNE8Q86YQ8 564 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 OR6Y1Q8NGX8 325 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 DNAJC18Q9H819 358 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 TYW1Q9NV66 732 aaKnown RBP20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 ACTL7BQ9Y614 415 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 PDE5AO76074 875 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 GNA11P29992 359 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 ZNF746Q6NUN9 644 aaPredicted RBP20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 DGKHQ86XP1 1220 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 BTBD6Q96KE9 485 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 PLA2G12BQ9BX93 195 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 SPATA7Q9P0W8 599 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 DNAJC12Q9UKB3 198 aa20.13■□□□□ 0.81
SMARCD1-201ENST00000381513 MYH3P11055 1940 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 ATMINO43313 823 aaPredicted RBP20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 SLC37A4O43826 429 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 ENO1P06733 434 aaKnown RBP20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 ASPHQ12797 758 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 ECM1Q16610 540 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 C1orf228Q6PIY5 440 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 SLAIN2Q9P270 581 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 NENFQ9UMX5 172 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 KDSRQ06136 332 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 EPHA7Q15375 998 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 RHOT2Q8IXI1 618 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 PTCD3Q96EY7 689 aaKnown RBP20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 PCDH11YQ9BZA8 1340 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 DKC1O60832 514 aaKnown RBP eCLIP20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 GGPS1O95749 300 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 FGFR1P11362 822 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 FGFR2P21802 821 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 MUTP22033 750 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 MAP3K10Q02779 954 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 MAPK6Q16659 721 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 REXO1Q8N1G1 1221 aaKnown RBP20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 DAGLBQ8NCG7 672 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 OSBPL8Q9BZF1 889 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 KCTD10Q9H3F6 313 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 VPS37BQ9H9H4 285 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 NDUFA13Q9P0J0 144 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 KIAA1024Q9UPX6 916 aa20.12■□□□□ 0.81
SMARCD1-201ENST00000381513 FER1L4A9Z1Z3 1794 aa20.11■□□□□ 0.81
SMARCD1-201ENST00000381513 AKAP3O75969 853 aa20.11■□□□□ 0.81
SMARCD1-201ENST00000381513 FTLP02792 175 aaPredicted RBP20.11■□□□□ 0.81
SMARCD1-201ENST00000381513 CDK4P11802 303 aa20.11■□□□□ 0.81
SMARCD1-201ENST00000381513 CRABP2P29373 138 aa20.11■□□□□ 0.81
SMARCD1-201ENST00000381513 CASP4P49662 377 aa20.11■□□□□ 0.81
SMARCD1-201ENST00000381513 LPCAT4Q643R3 524 aa20.11■□□□□ 0.81
SMARCD1-201ENST00000381513 MTBPQ96DY7 904 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms