RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 COG2Q14746 738 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 SYCP3Q8IZU3 236 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 STK32AQ8WU08 396 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 UTP4Q969X6 686 aaKnown RBP14.76□□□□□ -0.05
SDC1-202ENST00000381150 RUNDC3BQ96NL0 473 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 SCOCQ9UIL1 159 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 DNM3Q9UQ16 869 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 A0A0G2JND7 137 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 CFAP69A5D8W1 941 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 PODXLO00592 558 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 GM2AP17900 193 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 ATP5DP30049 168 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 IL9RQ01113 521 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 RSBN1LQ6PCB5 846 aaPredicted RBP14.76□□□□□ -0.05
SDC1-202ENST00000381150 RNF207Q6ZRF8 634 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 MCUR1Q96AQ8 359 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 GBP5Q96PP8 586 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 HSD17B14Q9BPX1 270 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 POLR3CQ9BUI4 534 aaPredicted RBP14.76□□□□□ -0.05
SDC1-202ENST00000381150 WDR18Q9BV38 432 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 PCIF1Q9H4Z3 704 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 NPHS2Q9NP85 383 aa14.76□□□□□ -0.05
SDC1-202ENST00000381150 UBE2TQ9NPD8 197 aaPredicted RBP14.76□□□□□ -0.05
SDC1-202ENST00000381150 ZNF70Q9UC06 446 aaPredicted RBP14.76□□□□□ -0.05
SDC1-202ENST00000381150 PEX5P50542 639 aa14.75□□□□□ -0.05
SDC1-202ENST00000381150 STAT2P52630 851 aa14.75□□□□□ -0.05
SDC1-202ENST00000381150 C2CD6Q53TS8 623 aa14.75□□□□□ -0.05
SDC1-202ENST00000381150 VPS52Q8N1B4 723 aa14.75□□□□□ -0.05
SDC1-202ENST00000381150 FAM151AQ8WW52 585 aa14.75□□□□□ -0.05
SDC1-202ENST00000381150 FGD4Q96M96 766 aa14.75□□□□□ -0.05
SDC1-202ENST00000381150 CYTH2Q99418 400 aa14.75□□□□□ -0.05
SDC1-202ENST00000381150 CLRN2A0PK11 232 aa14.75□□□□□ -0.05
SDC1-202ENST00000381150 FOXN3O00409 490 aaPredicted RBP14.75□□□□□ -0.05
SDC1-202ENST00000381150 CA4P22748 312 aa14.75□□□□□ -0.05
SDC1-202ENST00000381150 RCN1Q15293 331 aa14.75□□□□□ -0.05
SDC1-202ENST00000381150 MIGA2Q7L4E1 593 aa14.75□□□□□ -0.05
SDC1-202ENST00000381150 CDAN1Q8IWY9 1227 aa14.75□□□□□ -0.05
SDC1-202ENST00000381150 ZDHHC14Q8IZN3 488 aa14.75□□□□□ -0.05
SDC1-202ENST00000381150 B4GALNT2Q8NHY0 566 aa14.75□□□□□ -0.05
SDC1-202ENST00000381150 SLC35C1Q96A29 364 aa14.75□□□□□ -0.05
SDC1-202ENST00000381150 DYDC2Q96IM9 177 aa14.75□□□□□ -0.05
SDC1-202ENST00000381150 UBN1Q9NPG3 1134 aa14.75□□□□□ -0.05
SDC1-202ENST00000381150 PGAP2Q9UHJ9 254 aa14.75□□□□□ -0.05
SDC1-202ENST00000381150 NVLO15381 856 aaKnown RBP14.74□□□□□ -0.05
SDC1-202ENST00000381150 BAG2O95816 211 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 KCNA3P22001 575 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 FOXN2P32314 431 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 COILP38432 576 aaPredicted RBP14.74□□□□□ -0.05
SDC1-202ENST00000381150 MRPS35P82673 323 aaKnown RBP14.74□□□□□ -0.05
SDC1-202ENST00000381150 STRN3Q13033 797 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 EPHA7Q15375 998 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 DAB2IPQ5VWQ8 1189 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 ISLR2Q6UXK2 745 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 PPP4R3CPQ6ZMV5 832 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 OTOP1Q7RTM1 612 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 CCNJLQ8IV13 435 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 ERMNQ8TAM6 284 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 CKAP2Q8WWK9 683 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 STMN2Q93045 179 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 EIF2AK1Q9BQI3 630 aaKnown RBP14.74□□□□□ -0.05
SDC1-202ENST00000381150 RUSC1Q9BVN2 902 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 TTC7AQ9ULT0 858 aaPredicted RBP14.74□□□□□ -0.05
SDC1-202ENST00000381150 PHTF1Q9UMS5 762 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 ANKRD62A6NC57 917 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 MAPK13O15264 365 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 FAM13AO94988 1023 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 TPBGLP0DKB5 382 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 ZNF76P36508 570 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 CPA2P48052 419 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 PPP2R5EQ16537 467 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 GALNTL6Q49A17 601 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 TAF1BQ53T94 588 aaPredicted RBP14.74□□□□□ -0.05
SDC1-202ENST00000381150 SLFN11Q7Z7L1 901 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 CROCCP2Q86T23 111 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 TXLNGYQ9BZA5 131 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 RANBP17Q9H2T7 1088 aaKnown RBP14.74□□□□□ -0.05
SDC1-202ENST00000381150 DENND2DQ9H6A0 471 aaPredicted RBP14.74□□□□□ -0.05
SDC1-202ENST00000381150 CYP39A1Q9NYL5 469 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 RGL1Q9NZL6 768 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 ANAPC5Q9UJX4 755 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 NAALADL1Q9UQQ1 740 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 SYNGAP1Q96PV0 1343 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 GOLGA8RI6L899 631 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 AHCYL1O43865 530 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 EXOC3O60645 756 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 PEX11AO75192 247 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 PSMD10O75832 226 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 TMEM253P0C7T8 217 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 ALADP13716 330 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 ITGA8P53708 1063 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 TRAF1Q13077 416 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 BMT2Q1RMZ1 405 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 HHATQ5VTY9 493 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 CWF19L1Q69YN2 538 aaKnown RBP14.74□□□□□ -0.05
SDC1-202ENST00000381150 RFWD3Q6PCD5 774 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 SLC30A5Q8TAD4 765 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 CAMKK2Q96RR4 588 aa14.74□□□□□ -0.05
SDC1-202ENST00000381150 PDGFDQ9GZP0 370 aaPredicted RBP14.74□□□□□ -0.05
SDC1-202ENST00000381150 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.74□□□□□ -0.05
SDC1-202ENST00000381150 ZBTB21Q9ULJ3 1066 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms