RNA–Protein interactions for RNA: ENST00000380743.8

SMN2-203, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-203ENST00000380743 LINC00271P0C7V0 271 aa13.74□□□□□ -0.21
SMN2-203ENST00000380743 GRIK3Q13003 919 aa13.74□□□□□ -0.21
SMN2-203ENST00000380743 HSP90AA2PQ14568 343 aaPredicted RBP13.74□□□□□ -0.21
SMN2-203ENST00000380743 PSMD6Q15008 389 aa13.74□□□□□ -0.21
SMN2-203ENST00000380743 ZBTB6Q15916 424 aa13.74□□□□□ -0.21
SMN2-203ENST00000380743 FILIP1Q7Z7B0 1213 aa13.74□□□□□ -0.21
SMN2-203ENST00000380743 EFCAB13Q8IY85 973 aa13.74□□□□□ -0.21
SMN2-203ENST00000380743 LRRC43Q8N309 656 aa13.74□□□□□ -0.21
SMN2-203ENST00000380743 FIBCD1Q8N539 461 aa13.74□□□□□ -0.21
SMN2-203ENST00000380743 ENOX1Q8TC92 643 aaKnown RBP13.74□□□□□ -0.21
SMN2-203ENST00000380743 RSPH1Q8WYR4 309 aa13.74□□□□□ -0.21
SMN2-203ENST00000380743 KIF12Q96FN5 646 aa13.74□□□□□ -0.21
SMN2-203ENST00000380743 BORCS6Q96GS4 357 aa13.74□□□□□ -0.21
SMN2-203ENST00000380743 MKNK1Q9BUB5 465 aa13.74□□□□□ -0.21
SMN2-203ENST00000380743 NRDE2Q9H7Z3 1164 aa13.74□□□□□ -0.21
SMN2-203ENST00000380743 DNAJB4Q9UDY4 337 aa13.74□□□□□ -0.21
SMN2-203ENST00000380743 GBF1Q92538 1859 aa13.74□□□□□ -0.21
SMN2-203ENST00000380743 PTPRJQ12913 1337 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 REV3LO60673 3130 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 ANK1P16157 1881 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 EYSQ5T1H1 3165 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 LINC01553A4QN01 128 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 SLC16A3O15427 465 aaKnown RBP13.73□□□□□ -0.21
SMN2-203ENST00000380743 DLATP10515 647 aaKnown RBP13.73□□□□□ -0.21
SMN2-203ENST00000380743 EPB41P11171 864 aaKnown RBP13.73□□□□□ -0.21
SMN2-203ENST00000380743 DLG4P78352 724 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 SMAD3P84022 425 aaKnown RBP13.73□□□□□ -0.21
SMN2-203ENST00000380743 SOX4Q06945 474 aaPredicted RBP13.73□□□□□ -0.21
SMN2-203ENST00000380743 DSC1Q08554 894 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 TMEM132DQ14C87 1099 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 SPATA1Q5VX52 437 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 LMBRD2Q68DH5 695 aaPredicted RBP13.73□□□□□ -0.21
SMN2-203ENST00000380743 SPRED2Q7Z698 418 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 IRF2BP1Q8IU81 584 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 COLGALT2Q8IYK4 626 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 PARD3BQ8TEW8 1205 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 NAT10Q9H0A0 1025 aaKnown RBP13.73□□□□□ -0.21
SMN2-203ENST00000380743 GOLGA2P5Q9HBQ8 144 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 CACNG4Q9UBN1 327 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 TUBGCP4Q9UGJ1 667 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 MSRAQ9UJ68 235 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 DERAQ9Y315 318 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 C2CD2Q9Y426 696 aa13.73□□□□□ -0.21
SMN2-203ENST00000380743 LRRIQ3A6PVS8 624 aaPredicted RBP13.72□□□□□ -0.21
SMN2-203ENST00000380743 ZC3H11AO75152 810 aaKnown RBP eCLIP13.72□□□□□ -0.21
SMN2-203ENST00000380743 DNAJB2P25686 324 aa13.72□□□□□ -0.21
SMN2-203ENST00000380743 PBX3P40426 434 aa13.72□□□□□ -0.21
SMN2-203ENST00000380743 ZNF165P49910 485 aa13.72□□□□□ -0.21
SMN2-203ENST00000380743 GUCY2FP51841 1108 aa13.72□□□□□ -0.21
SMN2-203ENST00000380743 MCCD1P59942 119 aaPredicted RBP13.72□□□□□ -0.21
SMN2-203ENST00000380743 TFAMQ00059 246 aaKnown RBP13.72□□□□□ -0.21
SMN2-203ENST00000380743 RAB30Q15771 203 aa13.72□□□□□ -0.21
SMN2-203ENST00000380743 TPD52L1Q16890 204 aaPredicted RBP13.72□□□□□ -0.21
SMN2-203ENST00000380743 HSP90AA4PQ58FG1 418 aa13.72□□□□□ -0.21
SMN2-203ENST00000380743 C1orf220Q5T0J3 134 aa13.72□□□□□ -0.21
SMN2-203ENST00000380743 LRSAM1Q6UWE0 723 aa13.72□□□□□ -0.21
SMN2-203ENST00000380743 INTS8Q75QN2 995 aaKnown RBP13.72□□□□□ -0.21
SMN2-203ENST00000380743 OR5B17Q8NGF7 314 aa13.72□□□□□ -0.21
SMN2-203ENST00000380743 RABGGTAQ92696 567 aa13.72□□□□□ -0.21
SMN2-203ENST00000380743 CLP1Q92989 425 aaKnown RBP13.72□□□□□ -0.21
SMN2-203ENST00000380743 FAM193BQ96PV7 902 aaPredicted RBP13.72□□□□□ -0.21
SMN2-203ENST00000380743 FNBP1Q96RU3 617 aa13.72□□□□□ -0.21
SMN2-203ENST00000380743 TSPAN18Q96SJ8 248 aa13.72□□□□□ -0.21
SMN2-203ENST00000380743 BPIFA3Q9BQP9 254 aa13.72□□□□□ -0.21
SMN2-203ENST00000380743 PAAF1Q9BRP4 392 aa13.72□□□□□ -0.21
SMN2-203ENST00000380743 NKX2-4Q9H2Z4 354 aa13.72□□□□□ -0.21
SMN2-203ENST00000380743 SLC38A7Q9NVC3 462 aa13.72□□□□□ -0.21
SMN2-203ENST00000380743 NFE2L3Q9Y4A8 694 aa13.72□□□□□ -0.21
SMN2-203ENST00000380743 RALGAPA2Q2PPJ7 1873 aa13.72□□□□□ -0.21
SMN2-203ENST00000380743 CASTOR2A6NHX0 329 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 FGFR1OPO95684 399 aaKnown RBP13.71□□□□□ -0.21
SMN2-203ENST00000380743 TRIM49P0CI25 452 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 TRIM49CP0CI26 452 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 TNNI1P19237 187 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 IGFBP6P24592 240 aaPredicted RBP13.71□□□□□ -0.21
SMN2-203ENST00000380743 VAMP7P51809 220 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 BCAR1P56945 870 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 CLDN10P78369 228 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 MYL5Q02045 173 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 TAP1Q03518 808 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 BFSP1Q12934 665 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 TUSC3Q13454 348 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 NCAPHQ15003 741 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 SURF1Q15526 300 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 SPOUT1Q5T280 376 aaKnown RBP13.71□□□□□ -0.21
SMN2-203ENST00000380743 SCARA3Q6AZY7 606 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 FRMD5Q7Z6J6 570 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 WDR49Q8IV35 697 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 DHX40Q8IX18 779 aaKnown RBP13.71□□□□□ -0.21
SMN2-203ENST00000380743 AOPEPQ8N6M6 819 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 TMC2Q8TDI7 906 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 ZNF516Q92618 1163 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 CGRRF1Q99675 332 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 THAP9Q9H5L6 903 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 SAMSN1Q9NSI8 373 aaKnown RBP13.71□□□□□ -0.21
SMN2-203ENST00000380743 INTS13Q9NVM9 706 aa13.71□□□□□ -0.21
SMN2-203ENST00000380743 ARMCX3Q9UH62 379 aaPredicted RBP13.71□□□□□ -0.21
SMN2-203ENST00000380743 UBQLN1Q9UMX0 589 aaKnown RBP13.71□□□□□ -0.21
SMN2-203ENST00000380743 TDRD15B5MCY1 1934 aaKnown RBP13.71□□□□□ -0.21
SMN2-203ENST00000380743 NT5C1B-RDH14C9J2C7 533 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms