RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 CNTNAP2Q9UHC6 1331 aa24.79■■□□□ 1.56
VPS16-201ENST00000380443 CEP350Q5VT06 3117 aa24.78■■□□□ 1.56
VPS16-201ENST00000380443 GOLGA6L10A0A0M3HER8 536 aa24.78■■□□□ 1.56
VPS16-201ENST00000380443 BHMG1C9JSJ3 638 aaPredicted RBP24.78■■□□□ 1.56
VPS16-201ENST00000380443 RAD51CO43502 376 aa24.78■■□□□ 1.56
VPS16-201ENST00000380443 TXNP10599 105 aaKnown RBP24.78■■□□□ 1.56
VPS16-201ENST00000380443 RNASE9P60153 205 aaKnown RBP24.78■■□□□ 1.56
VPS16-201ENST00000380443 PAXIP1Q6ZW49 1069 aaPredicted RBP24.78■■□□□ 1.56
VPS16-201ENST00000380443 WDR49Q8IV35 697 aa24.78■■□□□ 1.56
VPS16-201ENST00000380443 ABRAQ8N0Z2 381 aa24.78■■□□□ 1.56
VPS16-201ENST00000380443 MREGQ8N565 214 aa24.78■■□□□ 1.56
VPS16-201ENST00000380443 ACO2Q99798 780 aaKnown RBP24.78■■□□□ 1.56
VPS16-201ENST00000380443 AVENQ9NQS1 362 aaPredicted RBP24.78■■□□□ 1.56
VPS16-201ENST00000380443 CNTN6Q9UQ52 1028 aa24.78■■□□□ 1.56
VPS16-201ENST00000380443 TULP1O00294 542 aaPredicted RBP24.77■■□□□ 1.56
VPS16-201ENST00000380443 POU5F1BQ06416 359 aa24.77■■□□□ 1.56
VPS16-201ENST00000380443 CUL2Q13617 745 aa24.77■■□□□ 1.56
VPS16-201ENST00000380443 LAMC2Q13753 1193 aa24.77■■□□□ 1.56
VPS16-201ENST00000380443 KLHL7Q8IXQ5 586 aa24.77■■□□□ 1.56
VPS16-201ENST00000380443 ZBTB42B2RXF5 422 aa24.77■■□□□ 1.56
VPS16-201ENST00000380443 OGTO15294 1046 aa24.77■■□□□ 1.56
VPS16-201ENST00000380443 SART1O43290 800 aaKnown RBP24.77■■□□□ 1.56
VPS16-201ENST00000380443 VNN1O95497 513 aa24.77■■□□□ 1.56
VPS16-201ENST00000380443 MCL1Q07820 350 aa24.77■■□□□ 1.56
VPS16-201ENST00000380443 GSPT2Q8IYD1 628 aaKnown RBP24.77■■□□□ 1.56
VPS16-201ENST00000380443 GOLGA6L1Q8N7Z2 621 aa24.77■■□□□ 1.56
VPS16-201ENST00000380443 ZNF653Q96CK0 615 aa24.77■■□□□ 1.56
VPS16-201ENST00000380443 PI4K2AQ9BTU6 479 aa24.77■■□□□ 1.56
VPS16-201ENST00000380443 IMPG2Q9BZV3 1241 aa24.77■■□□□ 1.56
VPS16-201ENST00000380443 VTA1Q9NP79 307 aa24.77■■□□□ 1.56
VPS16-201ENST00000380443 GOLGA6BA6NDN3 693 aa24.76■■□□□ 1.55
VPS16-201ENST00000380443 PRKCBP05771 671 aa24.76■■□□□ 1.55
VPS16-201ENST00000380443 CETPP11597 493 aa24.76■■□□□ 1.55
VPS16-201ENST00000380443 CTNNA2P26232 953 aa24.76■■□□□ 1.55
VPS16-201ENST00000380443 GJA5P36382 358 aa24.76■■□□□ 1.55
VPS16-201ENST00000380443 ZNF484Q5JVG2 852 aa24.76■■□□□ 1.55
VPS16-201ENST00000380443 WDR78Q5VTH9 848 aa24.76■■□□□ 1.55
VPS16-201ENST00000380443 RGMBQ6NW40 437 aa24.76■■□□□ 1.55
VPS16-201ENST00000380443 ZNF467Q7Z7K2 595 aaPredicted RBP24.76■■□□□ 1.55
VPS16-201ENST00000380443 FBXO16Q8IX29 292 aaPredicted RBP24.76■■□□□ 1.55
VPS16-201ENST00000380443 ZNF564Q8TBZ8 553 aaPredicted RBP24.76■■□□□ 1.55
VPS16-201ENST00000380443 RNPC3Q96LT9 517 aaKnown RBP24.76■■□□□ 1.55
VPS16-201ENST00000380443 ZSWIM1Q9BR11 485 aa24.76■■□□□ 1.55
VPS16-201ENST00000380443 NUP85Q9BW27 656 aa24.76■■□□□ 1.55
VPS16-201ENST00000380443 NFKBIZQ9BYH8 718 aa24.76■■□□□ 1.55
VPS16-201ENST00000380443 R3HDMLQ9H3Y0 253 aa24.76■■□□□ 1.55
VPS16-201ENST00000380443 ZCCHC17Q9NP64 241 aaKnown RBP24.76■■□□□ 1.55
VPS16-201ENST00000380443 ERAP1Q9NZ08 941 aa24.76■■□□□ 1.55
VPS16-201ENST00000380443 ZNFX1Q9P2E3 1918 aaKnown RBP24.76■■□□□ 1.55
VPS16-201ENST00000380443 CCDC66A2RUB6 948 aa24.75■■□□□ 1.55
VPS16-201ENST00000380443 STRNO43815 780 aa24.75■■□□□ 1.55
VPS16-201ENST00000380443 FGGP02679 453 aa24.75■■□□□ 1.55
VPS16-201ENST00000380443 UNGP13051 313 aaPredicted RBP24.75■■□□□ 1.55
VPS16-201ENST00000380443 GCLCP48506 637 aaPredicted RBP24.75■■□□□ 1.55
VPS16-201ENST00000380443 MKRN4PQ13434 485 aaPredicted RBP24.75■■□□□ 1.55
VPS16-201ENST00000380443 DNAJC5GQ8N7S2 189 aa24.75■■□□□ 1.55
VPS16-201ENST00000380443 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.75■■□□□ 1.55
VPS16-201ENST00000380443 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.75■■□□□ 1.55
VPS16-201ENST00000380443 ACKR2O00590 384 aa24.75■■□□□ 1.55
VPS16-201ENST00000380443 OPA1O60313 960 aa24.75■■□□□ 1.55
VPS16-201ENST00000380443 PHACTR2O75167 634 aa24.75■■□□□ 1.55
VPS16-201ENST00000380443 CLTAP09496 248 aa24.75■■□□□ 1.55
VPS16-201ENST00000380443 ACO1P21399 889 aaKnown RBP24.75■■□□□ 1.55
VPS16-201ENST00000380443 CARSP49589 748 aaKnown RBP24.75■■□□□ 1.55
VPS16-201ENST00000380443 TSHZ1Q6ZSZ6 1077 aa24.75■■□□□ 1.55
VPS16-201ENST00000380443 ZNF771Q7L3S4 317 aaPredicted RBP24.75■■□□□ 1.55
VPS16-201ENST00000380443 RNF149Q8NC42 400 aa24.75■■□□□ 1.55
VPS16-201ENST00000380443 CASKIN2Q8WXE0 1202 aa24.75■■□□□ 1.55
VPS16-201ENST00000380443 VCPIP1Q96JH7 1222 aa24.75■■□□□ 1.55
VPS16-201ENST00000380443 ADAM21Q9UKJ8 722 aa24.75■■□□□ 1.55
VPS16-201ENST00000380443 TRPC6Q9Y210 931 aa24.75■■□□□ 1.55
VPS16-201ENST00000380443 RBM47A0AV96 593 aaKnown RBP24.74■■□□□ 1.55
VPS16-201ENST00000380443 FAM189A1O60320 539 aa24.74■■□□□ 1.55
VPS16-201ENST00000380443 SYF2O95926 243 aaKnown RBP24.74■■□□□ 1.55
VPS16-201ENST00000380443 MARK3P27448 753 aa24.74■■□□□ 1.55
VPS16-201ENST00000380443 ZNF157P51786 506 aaPredicted RBP24.74■■□□□ 1.55
VPS16-201ENST00000380443 GTF2A2P52657 109 aa24.74■■□□□ 1.55
VPS16-201ENST00000380443 DRP2Q13474 957 aa24.74■■□□□ 1.55
VPS16-201ENST00000380443 NCOA4Q13772 614 aa24.74■■□□□ 1.55
VPS16-201ENST00000380443 ZNF792Q3KQV3 632 aa24.74■■□□□ 1.55
VPS16-201ENST00000380443 ARMCX2Q7L311 632 aa24.74■■□□□ 1.55
VPS16-201ENST00000380443 PKNOX2Q96KN3 472 aa24.74■■□□□ 1.55
VPS16-201ENST00000380443 TCHPQ9BT92 498 aa24.74■■□□□ 1.55
VPS16-201ENST00000380443 AP1M1Q9BXS5 423 aa24.74■■□□□ 1.55
VPS16-201ENST00000380443 FZD8Q9H461 694 aa24.74■■□□□ 1.55
VPS16-201ENST00000380443 HSF2BPO75031 334 aa24.73■■□□□ 1.55
VPS16-201ENST00000380443 CYP1A1P04798 512 aaPredicted RBP24.73■■□□□ 1.55
VPS16-201ENST00000380443 EDN1P05305 212 aa24.73■■□□□ 1.55
VPS16-201ENST00000380443 PROZP22891 400 aa24.73■■□□□ 1.55
VPS16-201ENST00000380443 PTENP60484 403 aa24.73■■□□□ 1.55
VPS16-201ENST00000380443 POU5F1Q01860 360 aaKnown RBP24.73■■□□□ 1.55
VPS16-201ENST00000380443 MESDQ14696 234 aa24.73■■□□□ 1.55
VPS16-201ENST00000380443 DCAF12L1Q5VU92 463 aa24.73■■□□□ 1.55
VPS16-201ENST00000380443 LMBRD2Q68DH5 695 aaPredicted RBP24.73■■□□□ 1.55
VPS16-201ENST00000380443 IFT81Q8WYA0 676 aa24.73■■□□□ 1.55
VPS16-201ENST00000380443 CD101Q93033 1021 aa24.73■■□□□ 1.55
VPS16-201ENST00000380443 EMID1Q96A84 441 aaPredicted RBP24.73■■□□□ 1.55
VPS16-201ENST00000380443 PLVAPQ9BX97 442 aa24.73■■□□□ 1.55
VPS16-201ENST00000380443 VPS18Q9P253 973 aa24.73■■□□□ 1.55
VPS16-201ENST00000380443 CNOT8Q9UFF9 292 aaKnown RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms