RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 KRT81Q14533 505 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 SNRNP35Q16560 246 aaKnown RBP12.09□□□□□ -0.47
SMAD9-202ENST00000379826 CEP55Q53EZ4 464 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 MCF2L2Q86YR7 1114 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 ATL2Q8NHH9 583 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 DHX38Q92620 1227 aaKnown RBP12.09□□□□□ -0.47
SMAD9-202ENST00000379826 GPRC5CQ9NQ84 441 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 TRIM33Q9UPN9 1127 aa12.09□□□□□ -0.47
SMAD9-202ENST00000379826 MYH6P13533 1939 aa12.08□□□□□ -0.47
SMAD9-202ENST00000379826 H7C0C1 242 aa12.08□□□□□ -0.47
SMAD9-202ENST00000379826 RALAP11233 206 aa12.08□□□□□ -0.47
SMAD9-202ENST00000379826 ATP5OP48047 213 aa12.08□□□□□ -0.47
SMAD9-202ENST00000379826 BPIFB4P59827 614 aa12.08□□□□□ -0.47
SMAD9-202ENST00000379826 SHROOM1Q2M3G4 852 aaPredicted RBP12.08□□□□□ -0.47
SMAD9-202ENST00000379826 GNPTABQ3T906 1256 aa12.08□□□□□ -0.47
SMAD9-202ENST00000379826 AP1ARQ63HQ0 302 aa12.08□□□□□ -0.47
SMAD9-202ENST00000379826 APBB1IPQ7Z5R6 666 aaPredicted RBP12.08□□□□□ -0.47
SMAD9-202ENST00000379826 POLR3CQ9BUI4 534 aaPredicted RBP12.08□□□□□ -0.47
SMAD9-202ENST00000379826 TOPORSQ9NS56 1045 aaPredicted RBP12.08□□□□□ -0.47
SMAD9-202ENST00000379826 DNM1LO00429 736 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 ASAP2O43150 1006 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 ECE2O60344 883 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 SMAD1Q15797 465 aaKnown RBP12.08□□□□□ -0.48
SMAD9-202ENST00000379826 Q4G0T1 1027 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 CYFIP1Q7L576 1253 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 MORC4Q8TE76 937 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 BCAS3Q9H6U6 928 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 AJAP1Q9UKB5 411 aaPredicted RBP12.08□□□□□ -0.48
SMAD9-202ENST00000379826 GINS2Q9Y248 185 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 GYG2O15488 501 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 DNAJC8O75937 253 aaPredicted RBP12.08□□□□□ -0.48
SMAD9-202ENST00000379826 P4HBP07237 508 aaKnown RBP12.08□□□□□ -0.48
SMAD9-202ENST00000379826 CCND1P24385 295 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 CAV1Q03135 178 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 ASTE1Q2TB18 679 aaPredicted RBP12.08□□□□□ -0.48
SMAD9-202ENST00000379826 ZFPM1Q8IX07 1006 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 KCTD6Q8NC69 237 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 TXNDC16Q9P2K2 825 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 MARF1Q9Y4F3 1742 aaKnown RBP12.08□□□□□ -0.48
SMAD9-202ENST00000379826 ARP10275 920 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 ESRRAP11474 423 aaPredicted RBP12.08□□□□□ -0.48
SMAD9-202ENST00000379826 GNA15P30679 374 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 HADHQ16836 314 aaKnown RBP12.08□□□□□ -0.48
SMAD9-202ENST00000379826 DEFB115Q30KQ5 88 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 ZNF572Q7Z3I7 529 aaPredicted RBP12.08□□□□□ -0.48
SMAD9-202ENST00000379826 DTX3LQ8TDB6 740 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 TMEM237Q96Q45 408 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 CALN1Q9BXU9 219 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 KIF13AQ9H1H9 1805 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 MYH7P12883 1935 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 CLGNO14967 610 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 TJP3O95049 919 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 MYBL1P10243 752 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 GHRP10912 638 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 EPHX2P34913 555 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 CDR2Q01850 454 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 ALCAMQ13740 583 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 FBXL13Q8NEE6 735 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 PWWP2AQ96N64 755 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 TSC22D3Q99576 134 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 SCAF8Q9UPN6 1271 aaKnown RBP12.08□□□□□ -0.48
SMAD9-202ENST00000379826 IGSF9BQ9UPX0 1349 aa12.08□□□□□ -0.48
SMAD9-202ENST00000379826 KCNJ2P63252 427 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 PPP2R5DQ14738 602 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 ERMARDQ5T6L9 678 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 MFSD14CQ5VZR4 134 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 DARS2Q6PI48 645 aaKnown RBP12.07□□□□□ -0.48
SMAD9-202ENST00000379826 ROPN1BQ9BZX4 212 aaPredicted RBP12.07□□□□□ -0.48
SMAD9-202ENST00000379826 ROPN1Q9HAT0 212 aaPredicted RBP12.07□□□□□ -0.48
SMAD9-202ENST00000379826 CICQ96RK0 1608 aaPredicted RBP12.07□□□□□ -0.48
SMAD9-202ENST00000379826 F5H423 210 aaPredicted RBP12.07□□□□□ -0.48
SMAD9-202ENST00000379826 PPFIA2O75334 1257 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 RARAP10276 462 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 OVGP1Q12889 678 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 ACCSLQ4AC99 568 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 PREPLQ4J6C6 727 aaPredicted RBP12.07□□□□□ -0.48
SMAD9-202ENST00000379826 ZNF720Q7Z2F6 126 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 PRUNE1Q86TP1 453 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 HES6Q96HZ4 224 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 NEU2Q9Y3R4 380 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 FAM47DPA6NHR8 397 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 MAP3K7O43318 606 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 QARSP47897 775 aaKnown RBP12.07□□□□□ -0.48
SMAD9-202ENST00000379826 NR2E1Q9Y466 385 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 CNTNAP4Q9C0A0 1308 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 TNPO2O14787 897 aaKnown RBP12.07□□□□□ -0.48
SMAD9-202ENST00000379826 RARGP13631 454 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 MAGEA4P43358 317 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 ALDH5A1P51649 535 aaPredicted RBP12.07□□□□□ -0.48
SMAD9-202ENST00000379826 PTF1AQ7RTS3 328 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 KAT5Q92993 513 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 ZNF341Q9BYN7 854 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 TJP1Q07157 1748 aa12.07□□□□□ -0.48
SMAD9-202ENST00000379826 A8MUI8 341 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 APLP1P51693 650 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 CBWD2Q8IUF1 395 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 RHOT1Q8IXI2 618 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 SERPINB12Q96P63 405 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 NYAP2Q9P242 653 aa12.06□□□□□ -0.48
SMAD9-202ENST00000379826 NXF1Q9UBU9 619 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms