RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 ITGA7Q13683 1181 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 LPIN1Q14693 890 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 PUM3Q15397 648 aaKnown RBP11.58□□□□□ -0.56
USP6NL-202ENST00000379237 IL17AQ16552 155 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 LPCAT2Q7L5N7 544 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 SIX5Q8N196 739 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 PNMA1Q8ND90 353 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 TIMMDC1Q9NPL8 285 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 FBXO6Q9NRD1 293 aaPredicted RBP11.58□□□□□ -0.56
USP6NL-202ENST00000379237 ATP8A2Q9NTI2 1148 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 TMEM59LQ9UK28 342 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 KIAA1024Q9UPX6 916 aa11.58□□□□□ -0.56
USP6NL-202ENST00000379237 NMT2O60551 498 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 CBFA2T3O75081 653 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 FKBP6O75344 327 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 EYA4O95677 639 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 FTLP02792 175 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-202ENST00000379237 KRT10P13645 584 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 CIITAP33076 1130 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 CYP2J2P51589 502 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 RCAN1P53805 252 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 NAALADL2Q58DX5 795 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 VSTM1Q6UX27 236 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 KIAA2013Q8IYS2 634 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 TTC25Q96NG3 672 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 FAM118BQ9BPY3 351 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 SHCBP1LQ9BZQ2 653 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 RRN3Q9NYV6 651 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 TRIM17Q9Y577 477 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 RPTORQ8N122 1335 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 ARHGEF28Q8N1W1 1705 aaKnown RBP11.57□□□□□ -0.56
USP6NL-202ENST00000379237 MYBP10242 640 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 ATF7P17544 494 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-202ENST00000379237 NCF2P19878 526 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-202ENST00000379237 PMLP29590 882 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 FOXN2P32314 431 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 STAT2P52630 851 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 ZNF200P98182 395 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-202ENST00000379237 IKQ13123 557 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-202ENST00000379237 DRAP1Q14919 205 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-202ENST00000379237 OASLQ15646 514 aaKnown RBP11.57□□□□□ -0.56
USP6NL-202ENST00000379237 ALX1Q15699 326 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 LPCAT4Q643R3 524 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 TMPRSS6Q8IU80 811 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 ZBED8Q8IZ13 594 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 DDI1Q8WTU0 396 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 MTA3Q9BTC8 594 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 KCNMB3Q9NPA1 279 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 PPP1R1BQ9UD71 204 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-202ENST00000379237 FCHO1O14526 889 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 FAM13AO94988 1023 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 INHBAP08476 426 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 AMPD1P23109 780 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 CDC16Q13042 620 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 MFSD5Q6N075 450 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 CROCCP3Q8IVE0 287 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 ZNF75CPQ92670 426 aaPredicted RBP11.57□□□□□ -0.56
USP6NL-202ENST00000379237 CAAP1Q9H8G2 361 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 NUB1Q9Y5A7 615 aa11.57□□□□□ -0.56
USP6NL-202ENST00000379237 METP08581 1390 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 NOP56O00567 594 aaKnown RBP11.56□□□□□ -0.56
USP6NL-202ENST00000379237 CFLARO15519 480 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 LPXNO60711 386 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 GGPS1O95749 300 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 ZNF76P36508 570 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 MAGEA4P43358 317 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 TFAP4Q01664 338 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 ACAD11Q709F0 780 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 POP1Q99575 1024 aaKnown RBP11.56□□□□□ -0.56
USP6NL-202ENST00000379237 KLHL25Q9H0H3 589 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 THAP2Q9H0W7 228 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 BCAP29Q9UHQ4 241 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 TCEAL9Q9UHQ7 104 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 SPDYE16A6NNV3 312 aaPredicted RBP11.56□□□□□ -0.56
USP6NL-202ENST00000379237 EDF1O60869 148 aaKnown RBP11.56□□□□□ -0.56
USP6NL-202ENST00000379237 TRMUO75648 421 aaKnown RBP11.56□□□□□ -0.56
USP6NL-202ENST00000379237 COMTP21964 271 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 CMPK2Q5EBM0 449 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 FOXB2Q5VYV0 432 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 POTEEQ6S8J3 1075 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 ATG4AQ8WYN0 398 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 GPR101Q96P66 508 aaPredicted RBP11.56□□□□□ -0.56
USP6NL-202ENST00000379237 TUBGCP4Q9UGJ1 667 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 IVNS1ABPQ9Y6Y0 642 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 ZCCHC11Q5TAX3 1644 aaKnown RBP11.56□□□□□ -0.56
USP6NL-202ENST00000379237 C15orf38-AP3S2A0A0A6YYH1 394 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 TMEM247A6NEH6 219 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 RBAK-RBAKDNI3L0D1 243 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 MCF2P10911 925 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 HIRAP54198 1017 aaPredicted RBP11.56□□□□□ -0.56
USP6NL-202ENST00000379237 TRIM16LQ309B1 348 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 WDR72Q3MJ13 1102 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 ANKRD20A4Q4UJ75 823 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 TRMT1LQ7Z2T5 733 aaKnown RBP11.56□□□□□ -0.56
USP6NL-202ENST00000379237 ARPINQ7Z6K5 226 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 CRLF3Q8IUI8 442 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 CORO1BQ9BR76 489 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 SAP30BPQ9UHR5 308 aaKnown RBP11.56□□□□□ -0.56
USP6NL-202ENST00000379237 ASAP1Q9ULH1 1129 aa11.56□□□□□ -0.56
USP6NL-202ENST00000379237 SRGAP2CP0DJJ0 459 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms