RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 KIAA1671Q9BY89 1806 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 BICDL2A1A5D9 508 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 LACTBL1A8MY62 500 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 NR3C1P04150 777 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 GALTP07902 379 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 BMP6P22004 513 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 NR2F2P24468 414 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 KRT17Q04695 432 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 SNRNP35Q16560 246 aaKnown RBP12.94□□□□□ -0.34
PCNA-201ENST00000379143 SKOR2Q2VWA4 1001 aaPredicted RBP12.94□□□□□ -0.34
PCNA-201ENST00000379143 ZCWPW2Q504Y3 356 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 FOXR2Q6PJQ5 311 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 RBM43Q6ZSC3 357 aaKnown RBP12.94□□□□□ -0.34
PCNA-201ENST00000379143 NOC3LQ8WTT2 800 aaKnown RBP12.94□□□□□ -0.34
PCNA-201ENST00000379143 MYLIPQ8WY64 445 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 FAM212AQ96EL1 285 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 KIF12Q96FN5 646 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 DDX27Q96GQ7 796 aaKnown RBP12.94□□□□□ -0.34
PCNA-201ENST00000379143 TTYH1Q9H313 450 aaPredicted RBP12.94□□□□□ -0.34
PCNA-201ENST00000379143 DMAC2Q9NW81 257 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 SPG21Q9NZD8 308 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 DNAJB4Q9UDY4 337 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 DACH1Q9UI36 760 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 MTUS1Q9ULD2 1270 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 PLAGL2Q9UPG8 496 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 FRMD4BQ9Y2L6 1034 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 FAN1Q9Y2M0 1017 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 C2CD2Q9Y426 696 aa12.94□□□□□ -0.34
PCNA-201ENST00000379143 GOLGA8IPA6NC78 632 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 GOLGA8JA6NMD2 632 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 H3BNC9 293 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 NRP1O14786 923 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 CYP3A5P20815 502 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 CCNE1P24864 410 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 OR1G1P47890 313 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 FKBP3Q00688 224 aaKnown RBP12.93□□□□□ -0.34
PCNA-201ENST00000379143 PLCB3Q01970 1234 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 UBE3AQ05086 875 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 GPM6BQ13491 265 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 TMEM132DQ14C87 1099 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 NAB2Q15742 525 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 GLRA4Q5JXX5 417 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 USP37Q86T82 979 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 TMEM169Q96HH4 297 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 ZMAT2Q96NC0 199 aaKnown RBP12.93□□□□□ -0.34
PCNA-201ENST00000379143 COLEC11Q9BWP8 271 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 CERS4Q9HA82 394 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 HCSTQ9UBK5 93 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 PUF60Q9UHX1 559 aaKnown RBP12.93□□□□□ -0.34
PCNA-201ENST00000379143 UBQLN1Q9UMX0 589 aaKnown RBP12.93□□□□□ -0.34
PCNA-201ENST00000379143 LZTS1Q9Y250 596 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 PDCD11Q14690 1871 aaKnown RBP12.93□□□□□ -0.34
PCNA-201ENST00000379143 CHD9Q3L8U1 2897 aa12.93□□□□□ -0.34
PCNA-201ENST00000379143 PPP1R3GB7ZBB8 358 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 CETN3O15182 167 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 MAPK13O15264 365 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 MEFVO15553 781 aaPredicted RBP12.92□□□□□ -0.34
PCNA-201ENST00000379143 FGF18O76093 207 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 RPL9P32969 192 aaKnown RBP12.92□□□□□ -0.34
PCNA-201ENST00000379143 SLC11A1P49279 550 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 NLRP12P59046 1061 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 PAK1Q13153 545 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 ADAM9Q13443 819 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 ZBTB6Q15916 424 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 CT47A1Q5JQC4 288 aaPredicted RBP12.92□□□□□ -0.34
PCNA-201ENST00000379143 JADE1Q6IE81 842 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 KLHL10Q6JEL2 608 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 SASS6Q6UVJ0 657 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 SPRED2Q7Z698 418 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 CBWD2Q8IUF1 395 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 SLC39A11Q8N1S5 342 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 KLHL23Q8NBE8 558 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 RDH13Q8NBN7 331 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 BEST2Q8NFU1 509 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 CACTINQ8WUQ7 758 aaKnown RBP12.92□□□□□ -0.34
PCNA-201ENST00000379143 LMAN2LQ9H0V9 348 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 CXCL16Q9H2A7 254 aa12.92□□□□□ -0.34
PCNA-201ENST00000379143 CASTOR2A6NHX0 329 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 TMEM189-UBE2V1I3L0A0 370 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 B4GALT3O60512 393 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 LETM1O95202 739 aaPredicted RBP12.91□□□□□ -0.34
PCNA-201ENST00000379143 CD44P16070 742 aaKnown RBP12.91□□□□□ -0.34
PCNA-201ENST00000379143 PSMC2P35998 433 aaKnown RBP12.91□□□□□ -0.34
PCNA-201ENST00000379143 PBX3P40426 434 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 CYP24A1Q07973 514 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 BMS1Q14692 1282 aaKnown RBP12.91□□□□□ -0.34
PCNA-201ENST00000379143 GRIN2CQ14957 1233 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 PSMD6Q15008 389 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 PTPROQ16827 1216 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 SPATA1Q5VX52 437 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 CEP135Q66GS9 1140 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 ANKRD40Q6AI12 368 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 CAVIN1Q6NZI2 390 aaKnown RBP12.91□□□□□ -0.34
PCNA-201ENST00000379143 DCLRE1AQ6PJP8 1040 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 ZSWIM2Q8NEG5 633 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 NELFBQ8WX92 580 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 IGSF21Q96ID5 467 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 MFSD14AQ96MC6 490 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 FNBP1Q96RU3 617 aa12.91□□□□□ -0.34
PCNA-201ENST00000379143 GAS2L1Q99501 681 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms