RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 C2orf40Q9H1Z8 148 aa19.61■□□□□ 0.73
PDLIM4-202ENST00000379018 FZD8Q9H461 694 aa19.61■□□□□ 0.73
PDLIM4-202ENST00000379018 GOLGA2P5Q9HBQ8 144 aa19.61■□□□□ 0.73
PDLIM4-202ENST00000379018 POLD4Q9HCU8 107 aa19.61■□□□□ 0.73
PDLIM4-202ENST00000379018 ZSCAN32Q9NX65 697 aa19.61■□□□□ 0.73
PDLIM4-202ENST00000379018 MTRRQ9UBK8 725 aa19.61■□□□□ 0.73
PDLIM4-202ENST00000379018 NDRG2Q9UN36 371 aaKnown RBP19.61■□□□□ 0.73
PDLIM4-202ENST00000379018 PCDHGA2Q9Y5H1 932 aa19.61■□□□□ 0.73
PDLIM4-202ENST00000379018 BTBD18B2RXH4 712 aa19.6■□□□□ 0.73
PDLIM4-202ENST00000379018 BRCC3P46736 316 aa19.6■□□□□ 0.73
PDLIM4-202ENST00000379018 CLCNKBP51801 687 aa19.6■□□□□ 0.73
PDLIM4-202ENST00000379018 GRM2Q14416 872 aa19.6■□□□□ 0.73
PDLIM4-202ENST00000379018 NAB2Q15742 525 aa19.6■□□□□ 0.73
PDLIM4-202ENST00000379018 CNTNAP3BQ96NU0 1288 aa19.6■□□□□ 0.73
PDLIM4-202ENST00000379018 CNTNAP3Q9BZ76 1288 aa19.6■□□□□ 0.73
PDLIM4-202ENST00000379018 KCNH3Q9ULD8 1083 aa19.6■□□□□ 0.73
PDLIM4-202ENST00000379018 NCAM2O15394 837 aa19.59■□□□□ 0.73
PDLIM4-202ENST00000379018 MED24O75448 989 aa19.59■□□□□ 0.73
PDLIM4-202ENST00000379018 LRG1P02750 347 aa19.59■□□□□ 0.73
PDLIM4-202ENST00000379018 CENPBP07199 599 aaPredicted RBP19.59■□□□□ 0.73
PDLIM4-202ENST00000379018 SPATA31C1P0DKV0 1188 aa19.59■□□□□ 0.73
PDLIM4-202ENST00000379018 FGFR3P22607 806 aa19.59■□□□□ 0.73
PDLIM4-202ENST00000379018 MCM7P33993 719 aa19.59■□□□□ 0.73
PDLIM4-202ENST00000379018 LPAL2Q16609 132 aa19.59■□□□□ 0.73
PDLIM4-202ENST00000379018 FAM187BQ17R55 369 aa19.59■□□□□ 0.73
PDLIM4-202ENST00000379018 UVSSAQ2YD98 709 aa19.59■□□□□ 0.73
PDLIM4-202ENST00000379018 TANGO2Q6ICL3 276 aa19.59■□□□□ 0.73
PDLIM4-202ENST00000379018 ZNF852Q6ZMS4 543 aa19.59■□□□□ 0.73
PDLIM4-202ENST00000379018 DDX27Q96GQ7 796 aaKnown RBP19.59■□□□□ 0.73
PDLIM4-202ENST00000379018 OSBPL6Q9BZF3 934 aa19.59■□□□□ 0.73
PDLIM4-202ENST00000379018 TMEM60Q9H2L4 133 aa19.59■□□□□ 0.73
PDLIM4-202ENST00000379018 CDV3Q9UKY7 258 aaKnown RBP19.59■□□□□ 0.73
PDLIM4-202ENST00000379018 TPRP12270 2363 aaKnown RBP19.59■□□□□ 0.73
PDLIM4-202ENST00000379018 ARHGEF35A5YM69 484 aa19.58■□□□□ 0.72
PDLIM4-202ENST00000379018 PRRG1O14668 218 aa19.58■□□□□ 0.72
PDLIM4-202ENST00000379018 FDPSP14324 419 aaKnown RBP19.58■□□□□ 0.72
PDLIM4-202ENST00000379018 MAGEA9P43362 315 aa19.58■□□□□ 0.72
PDLIM4-202ENST00000379018 PADI6Q6TGC4 694 aa19.58■□□□□ 0.72
PDLIM4-202ENST00000379018 CATSPER3Q86XQ3 398 aa19.58■□□□□ 0.72
PDLIM4-202ENST00000379018 DIS3L2Q8IYB7 885 aaKnown RBP19.58■□□□□ 0.72
PDLIM4-202ENST00000379018 CORO1BQ9BR76 489 aa19.58■□□□□ 0.72
PDLIM4-202ENST00000379018 ACKR2O00590 384 aa19.57■□□□□ 0.72
PDLIM4-202ENST00000379018 ECI2O75521 394 aa19.57■□□□□ 0.72
PDLIM4-202ENST00000379018 POU2F2P09086 479 aa19.57■□□□□ 0.72
PDLIM4-202ENST00000379018 XRCC6P12956 609 aaKnown RBP eCLIP19.57■□□□□ 0.72
PDLIM4-202ENST00000379018 ELF1P32519 619 aa19.57■□□□□ 0.72
PDLIM4-202ENST00000379018 ATXN1P54253 815 aaKnown RBP19.57■□□□□ 0.72
PDLIM4-202ENST00000379018 OSTNP61366 133 aa19.57■□□□□ 0.72
PDLIM4-202ENST00000379018 MTAPQ13126 283 aa19.57■□□□□ 0.72
PDLIM4-202ENST00000379018 DCAF4L1Q3SXM0 396 aa19.57■□□□□ 0.72
PDLIM4-202ENST00000379018 C3orf58Q8NDZ4 430 aa19.57■□□□□ 0.72
PDLIM4-202ENST00000379018 TCEAL4Q96EI5 215 aa19.57■□□□□ 0.72
PDLIM4-202ENST00000379018 MTMR9Q96QG7 549 aa19.57■□□□□ 0.72
PDLIM4-202ENST00000379018 CCDC113Q9H0I3 377 aa19.57■□□□□ 0.72
PDLIM4-202ENST00000379018 BRD9Q9H8M2 597 aa19.57■□□□□ 0.72
PDLIM4-202ENST00000379018 TUFT1Q9NNX1 390 aa19.57■□□□□ 0.72
PDLIM4-202ENST00000379018 GMEB2Q9UKD1 530 aa19.57■□□□□ 0.72
PDLIM4-202ENST00000379018 MRPS17Q9Y2R5 130 aaKnown RBP19.57■□□□□ 0.72
PDLIM4-202ENST00000379018 DCDC2BA2VCK2 349 aa19.56■□□□□ 0.72
PDLIM4-202ENST00000379018 KRT37O76014 449 aa19.56■□□□□ 0.72
PDLIM4-202ENST00000379018 LARGE1O95461 756 aa19.56■□□□□ 0.72
PDLIM4-202ENST00000379018 ROR1Q01973 937 aa19.56■□□□□ 0.72
PDLIM4-202ENST00000379018 TRIM29Q14134 588 aa19.56■□□□□ 0.72
PDLIM4-202ENST00000379018 ATF7IP2Q5U623 682 aa19.56■□□□□ 0.72
PDLIM4-202ENST00000379018 POTEHQ6S545 545 aa19.56■□□□□ 0.72
PDLIM4-202ENST00000379018 ANKS3Q6ZW76 656 aa19.56■□□□□ 0.72
PDLIM4-202ENST00000379018 ZBTB44Q8NCP5 570 aa19.56■□□□□ 0.72
PDLIM4-202ENST00000379018 CLDN23Q96B33 292 aa19.56■□□□□ 0.72
PDLIM4-202ENST00000379018 PPP1R10Q96QC0 940 aaKnown RBP19.56■□□□□ 0.72
PDLIM4-202ENST00000379018 NACC1Q96RE7 527 aa19.56■□□□□ 0.72
PDLIM4-202ENST00000379018 NELL2Q99435 816 aa19.56■□□□□ 0.72
PDLIM4-202ENST00000379018 EPC1Q9H2F5 836 aa19.56■□□□□ 0.72
PDLIM4-202ENST00000379018 GDE1Q9NZC3 331 aa19.56■□□□□ 0.72
PDLIM4-202ENST00000379018 TMEM189-UBE2V1I3L0A0 370 aa19.55■□□□□ 0.72
PDLIM4-202ENST00000379018 EPB41L2O43491 1005 aaKnown RBP19.55■□□□□ 0.72
PDLIM4-202ENST00000379018 TRAPPC3O43617 180 aa19.55■□□□□ 0.72
PDLIM4-202ENST00000379018 PTPN2P17706 415 aa19.55■□□□□ 0.72
PDLIM4-202ENST00000379018 NAMPTP43490 491 aa19.55■□□□□ 0.72
PDLIM4-202ENST00000379018 LMNB2Q03252 620 aa19.55■□□□□ 0.72
PDLIM4-202ENST00000379018 ADCY1Q08828 1119 aa19.55■□□□□ 0.72
PDLIM4-202ENST00000379018 UPP1Q16831 310 aa19.55■□□□□ 0.72
PDLIM4-202ENST00000379018 NT5DC1Q5TFE4 455 aa19.55■□□□□ 0.72
PDLIM4-202ENST00000379018 CD300LGQ6UXG3 332 aa19.55■□□□□ 0.72
PDLIM4-202ENST00000379018 IFT74Q96LB3 600 aa19.55■□□□□ 0.72
PDLIM4-202ENST00000379018 CYP4F11Q9HBI6 524 aa19.55■□□□□ 0.72
PDLIM4-202ENST00000379018 PRMT8Q9NR22 394 aaPredicted RBP19.55■□□□□ 0.72
PDLIM4-202ENST00000379018 BACE2Q9Y5Z0 518 aa19.55■□□□□ 0.72
PDLIM4-202ENST00000379018 F5P12259 2224 aa19.55■□□□□ 0.72
PDLIM4-202ENST00000379018 WDR27A2RRH5 827 aa19.54■□□□□ 0.72
PDLIM4-202ENST00000379018 JAK2O60674 1132 aa19.54■□□□□ 0.72
PDLIM4-202ENST00000379018 CYP11B2P19099 503 aa19.54■□□□□ 0.72
PDLIM4-202ENST00000379018 RPS9P46781 194 aaKnown RBP19.54■□□□□ 0.72
PDLIM4-202ENST00000379018 RBM25P49756 843 aaKnown RBP19.54■□□□□ 0.72
PDLIM4-202ENST00000379018 GUCY1B3Q02153 619 aa19.54■□□□□ 0.72
PDLIM4-202ENST00000379018 SOX4Q06945 474 aaPredicted RBP19.54■□□□□ 0.72
PDLIM4-202ENST00000379018 PPP2R5AQ15172 486 aa19.54■□□□□ 0.72
PDLIM4-202ENST00000379018 FAM78AQ5JUQ0 283 aa19.54■□□□□ 0.72
PDLIM4-202ENST00000379018 PRR23BQ6ZRT6 265 aa19.54■□□□□ 0.72
PDLIM4-202ENST00000379018 PDZD4Q76G19 769 aaPredicted RBP19.54■□□□□ 0.72
PDLIM4-202ENST00000379018 GPR161Q8N6U8 529 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms