RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 LRRC74AQ0VAA2 488 aa11.8□□□□□ -0.52
RAD50-201ENST00000378823 MDH1BQ5I0G3 518 aa11.8□□□□□ -0.52
RAD50-201ENST00000378823 RCOR2Q8IZ40 523 aa11.8□□□□□ -0.52
RAD50-201ENST00000378823 PPP1R2P1Q96PQ5 205 aa11.8□□□□□ -0.52
RAD50-201ENST00000378823 EIF2AK1Q9BQI3 630 aaKnown RBP11.8□□□□□ -0.52
RAD50-201ENST00000378823 THTPAQ9BU02 230 aa11.8□□□□□ -0.52
RAD50-201ENST00000378823 XPO7Q9UIA9 1087 aaKnown RBP11.8□□□□□ -0.52
RAD50-201ENST00000378823 NEDD4P46934 1319 aa11.8□□□□□ -0.52
RAD50-201ENST00000378823 TPI1P60174 286 aa11.8□□□□□ -0.52
RAD50-201ENST00000378823 COBLL1Q53SF7 1204 aa11.8□□□□□ -0.52
RAD50-201ENST00000378823 AGO2Q9UKV8 859 aaKnown RBP11.8□□□□□ -0.52
RAD50-201ENST00000378823 SNX12Q9UMY4 172 aa11.8□□□□□ -0.52
RAD50-201ENST00000378823 AGTP01019 485 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 CDC27P30260 824 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 C6orf10Q5SRN2 563 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 RTKN2Q8IZC4 609 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 NSUN6Q8TEA1 469 aaKnown RBP11.79□□□□□ -0.52
RAD50-201ENST00000378823 ENO3P13929 434 aaPredicted RBP11.79□□□□□ -0.52
RAD50-201ENST00000378823 CDK17Q00537 523 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 PIGHQ14442 188 aaPredicted RBP11.79□□□□□ -0.52
RAD50-201ENST00000378823 PKN3Q6P5Z2 889 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 ATP9BO43861 1147 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 GRAPQ13588 217 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 DDX42Q86XP3 938 aaKnown RBP eCLIP11.79□□□□□ -0.52
RAD50-201ENST00000378823 GPD1LQ8N335 351 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 GRAPLQ8TC17 118 aaPredicted RBP11.79□□□□□ -0.52
RAD50-201ENST00000378823 C18orf8Q96DM3 657 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 POLR3FQ9H1D9 316 aaPredicted RBP11.79□□□□□ -0.52
RAD50-201ENST00000378823 FAM217BQ9NTX9 383 aaPredicted RBP11.79□□□□□ -0.52
RAD50-201ENST00000378823 MAP3K20Q9NYL2 800 aaKnown RBP11.79□□□□□ -0.52
RAD50-201ENST00000378823 NINQ8N4C6 2090 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 NLRP1Q9C000 1473 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 GOLGA8TH3BQL2 631 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 KCNA3P22001 575 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 SSTR3P32745 418 aaPredicted RBP11.79□□□□□ -0.52
RAD50-201ENST00000378823 NLRP11P59045 1033 aaKnown RBP11.79□□□□□ -0.52
RAD50-201ENST00000378823 UBE3AQ05086 875 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 CCDC15Q0P6D6 951 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 UGP2Q16851 508 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 ANKRD40Q6AI12 368 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 PID1Q7Z2X4 250 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 ADGRF4Q8IZF3 695 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 TADA1Q96BN2 335 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 ABT1Q9ULW3 272 aaKnown RBP11.79□□□□□ -0.52
RAD50-201ENST00000378823 ZHX2Q9Y6X8 837 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 MYH13Q9UKX3 1938 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 USP11P51784 963 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 CYFIP1Q7L576 1253 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 TRPM8Q7Z2W7 1104 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 TBC1D19Q8N5T2 526 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 SYTL2Q9HCH5 934 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 PSMD3O43242 534 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 PPP1R37O75864 691 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 RALAP11233 206 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 SLC30A9Q6PML9 568 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 AGGF1Q8N302 714 aaeCLIP11.79□□□□□ -0.528e-7■□□□□ 10.6
RAD50-201ENST00000378823 TMEM47Q9BQJ4 181 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 IGSF1Q8N6C5 1336 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 KLHL2O95198 593 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 LCP1P13796 627 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 IRX1P78414 480 aaPredicted RBP11.79□□□□□ -0.52
RAD50-201ENST00000378823 CCDC142Q17RM4 750 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 ANKMY2Q8IV38 441 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 KIF12Q96FN5 646 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 KCNK16Q96T55 309 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 SPON2Q9BUD6 331 aa11.79□□□□□ -0.52
RAD50-201ENST00000378823 ALG13Q9NP73 1137 aaKnown RBP11.79□□□□□ -0.52
RAD50-201ENST00000378823 PSMC3IPQ9P2W1 217 aaPredicted RBP11.79□□□□□ -0.52
RAD50-201ENST00000378823 USP6P35125 1406 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 SPDYE5A6NIY4 337 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 EIF3HO15372 352 aaKnown RBP eCLIP11.78□□□□□ -0.523e-7■■■■■ 31.8
RAD50-201ENST00000378823 PYGMP11217 842 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 SMAD1Q15797 465 aaKnown RBP11.78□□□□□ -0.52
RAD50-201ENST00000378823 SPDYE7PQ495Y7 208 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 DALRD3Q5D0E6 543 aaKnown RBP11.78□□□□□ -0.52
RAD50-201ENST00000378823 TNIP3Q96KP6 325 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 CDYLQ9Y232 598 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 CNTRLQ7Z7A1 2325 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 NCAPD2Q15021 1401 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 CASZ1Q86V15 1759 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 MYH1P12882 1939 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 MYH2Q9UKX2 1941 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 MYH4Q9Y623 1939 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 P4HBP07237 508 aaKnown RBP11.78□□□□□ -0.52
RAD50-201ENST00000378823 CLK1P49759 484 aaKnown RBP11.78□□□□□ -0.52
RAD50-201ENST00000378823 NUDT18Q6ZVK8 323 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 PTPRN2Q92932 1015 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 ARHGEF26Q96DR7 871 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 SENP7Q9BQF6 1050 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 PIH1D3Q9NQM4 214 aaKnown RBP11.78□□□□□ -0.52
RAD50-201ENST00000378823 GABBR1Q9UBS5 961 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 UGGT1Q9NYU2 1555 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 MYL2P10916 166 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 ZNF200P98182 395 aaPredicted RBP11.78□□□□□ -0.52
RAD50-201ENST00000378823 KCNB1Q14721 858 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 SLC18A3Q16572 532 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 KHDRBS2Q5VWX1 349 aaKnown RBP11.78□□□□□ -0.52
RAD50-201ENST00000378823 SNRNP48Q6IEG0 339 aaKnown RBP11.78□□□□□ -0.52
RAD50-201ENST00000378823 STK33Q9BYT3 514 aa11.78□□□□□ -0.52
RAD50-201ENST00000378823 CCDC134Q9H6E4 229 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms