RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 TUBB2BQ9BVA1 445 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 MTMR12Q9C0I1 747 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 CENPFP49454 3210 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 SMIM35A0A1B0GVV1 85 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 MEFVO15553 781 aaPredicted RBP18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 GPR32O75388 356 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 H2AFZP0C0S5 128 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 MCF2P10911 925 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 CHRNB2P17787 502 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 AP3M2P53677 418 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 PURAQ00577 322 aaKnown RBP18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 TRIM32Q13049 653 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 NCOA4Q13772 614 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 DEFB115Q30KQ5 88 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 H2AFVQ71UI9 128 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 ENOSF1Q7L5Y1 443 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 EFCAB13Q8IY85 973 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 MNS1Q8NEH6 495 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 TAS2R14Q9NYV8 317 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 INTUQ9ULD6 942 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 JRKLQ9Y4A0 524 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 TADA3O75528 432 aa18.68■□□□□ 0.58
THUMPD2-201ENST00000378727 CST3P01034 146 aaPredicted RBP18.68■□□□□ 0.58
THUMPD2-201ENST00000378727 CXCL8P10145 99 aa18.68■□□□□ 0.58
THUMPD2-201ENST00000378727 CYP2C9P11712 490 aa18.68■□□□□ 0.58
THUMPD2-201ENST00000378727 FGFR4P22455 802 aa18.68■□□□□ 0.58
THUMPD2-201ENST00000378727 GALCP54803 685 aa18.68■□□□□ 0.58
THUMPD2-201ENST00000378727 ZNF200P98182 395 aaPredicted RBP18.68■□□□□ 0.58
THUMPD2-201ENST00000378727 SURF1Q15526 300 aa18.68■□□□□ 0.58
THUMPD2-201ENST00000378727 MFSD14CQ5VZR4 134 aa18.68■□□□□ 0.58
THUMPD2-201ENST00000378727 RPUSD2Q8IZ73 545 aaKnown RBP18.68■□□□□ 0.58
THUMPD2-201ENST00000378727 ALS2CR12Q96Q35 445 aa18.68■□□□□ 0.58
THUMPD2-201ENST00000378727 CDHR5Q9HBB8 845 aa18.68■□□□□ 0.58
THUMPD2-201ENST00000378727 CASP8AP2Q9UKL3 1982 aa18.68■□□□□ 0.58
THUMPD2-201ENST00000378727 TMCO5BA8MYB1 307 aa18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 B4GALT4O60513 344 aa18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 NAP1L1P55209 391 aaKnown RBP18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 ZNF710Q8N1W2 664 aa18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 FAM81BQ96LP2 452 aa18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 PCDHB18PQ96TA0 734 aa18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 SEPT11Q9NVA2 429 aaKnown RBP18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 NUB1Q9Y5A7 615 aa18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 PCDHGC5Q9Y5F6 944 aa18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 UMODL1Q5DID0 1318 aa18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 A0A1B0GUA9 196 aa18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 TREHO43280 583 aa18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 PHACTR2O75167 634 aa18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 C6orf222P0C671 652 aaPredicted RBP18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 STAG3L1P0CL83 205 aa18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 CYP11B1P15538 503 aa18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 GJA9P57773 515 aa18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 NOP14P78316 857 aaKnown RBP18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 DUOXA2Q1HG44 320 aa18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 RPF1Q9H9Y2 349 aaKnown RBP18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 GINS2Q9Y248 185 aa18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 SAR1BQ9Y6B6 198 aa18.67■□□□□ 0.58
THUMPD2-201ENST00000378727 SRGAP2O75044 1071 aa18.66■□□□□ 0.58
THUMPD2-201ENST00000378727 PALMO75781 387 aa18.66■□□□□ 0.58
THUMPD2-201ENST00000378727 ERLIN2O94905 339 aa18.66■□□□□ 0.58
THUMPD2-201ENST00000378727 HOXC8P31273 242 aa18.66■□□□□ 0.58
THUMPD2-201ENST00000378727 CUL2Q13617 745 aa18.66■□□□□ 0.58
THUMPD2-201ENST00000378727 ERCC6LQ2NKX8 1250 aa18.66■□□□□ 0.58
THUMPD2-201ENST00000378727 TAF3Q5VWG9 929 aa18.66■□□□□ 0.58
THUMPD2-201ENST00000378727 DNAJB3Q8WWF6 145 aa18.66■□□□□ 0.58
THUMPD2-201ENST00000378727 DDX1Q92499 740 aaKnown RBP18.66■□□□□ 0.58
THUMPD2-201ENST00000378727 KATNAL1Q9BW62 490 aa18.66■□□□□ 0.58
THUMPD2-201ENST00000378727 FAM170AA1A519 330 aa18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 GRID2IPA4D2P6 1211 aa18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 ASS1P00966 412 aaKnown RBP18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 CLTAP09496 248 aa18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 KRT5P13647 590 aa18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 ACO1P21399 889 aaKnown RBP18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 TFAMQ00059 246 aaKnown RBP18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 FMO1Q01740 532 aa18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 SP3Q02447 781 aa18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 ELF2Q15723 593 aa18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 WHAMMP3Q1A5X7 153 aa18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 EFCAB8A8MWE9 144 aa18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 IL18RAPO95256 599 aa18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 CALCAP01258 141 aa18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 MMEP08473 750 aa18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 HOXA11P31270 313 aaPredicted RBP18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 MYL6P60660 151 aa18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 CDC42EP1Q00587 391 aa18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 CACNB2Q08289 660 aaPredicted RBP18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 ANKRD7Q92527 254 aa18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 OSMRQ99650 979 aa18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 GCOM2Q9BZD3 368 aaPredicted RBP18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 UPF3AQ9H1J1 476 aaKnown RBP18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 RNF186Q9NXI6 227 aa18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 PUF60Q9UHX1 559 aaKnown RBP18.65■□□□□ 0.58
THUMPD2-201ENST00000378727 SCN10AQ9Y5Y9 1956 aa18.64■□□□□ 0.58
THUMPD2-201ENST00000378727 A0A0A6YYK5 440 aaPredicted RBP18.64■□□□□ 0.57
THUMPD2-201ENST00000378727 LACTBL1A8MY62 500 aa18.64■□□□□ 0.57
THUMPD2-201ENST00000378727 NCK2O43639 380 aa18.64■□□□□ 0.57
THUMPD2-201ENST00000378727 PGK1P00558 417 aa18.64■□□□□ 0.57
THUMPD2-201ENST00000378727 NFICP08651 508 aa18.64■□□□□ 0.57
THUMPD2-201ENST00000378727 TMEM253P0C7T8 217 aa18.64■□□□□ 0.57
THUMPD2-201ENST00000378727 GNASQ5JWF2 1037 aa18.64■□□□□ 0.57
THUMPD2-201ENST00000378727 TLR10Q9BXR5 811 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms