RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 CDC42BPAQ5VT25 1732 aa12.65□□□□□ -0.38
PCDHA9-201ENST00000378122 UTYO14607 1347 aa12.65□□□□□ -0.38
PCDHA9-201ENST00000378122 KDM1AO60341 852 aa12.65□□□□□ -0.39
PCDHA9-201ENST00000378122 RAG1P15918 1043 aa12.65□□□□□ -0.39
PCDHA9-201ENST00000378122 GUF1Q8N442 669 aaKnown RBP12.65□□□□□ -0.39
PCDHA9-201ENST00000378122 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.65□□□□□ -0.39
PCDHA9-201ENST00000378122 RNF103-CHMP3A0A140T963 221 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 RCAN1P53805 252 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 FLOT2Q14254 428 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 SLC15A2Q16348 729 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 GNASQ5JWF2 1037 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 RAD9BQ6WBX8 426 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 SLC9A2Q9UBY0 812 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 PITPNM2Q9BZ72 1349 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 SUPT3HO75486 399 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 KCNA3P22001 575 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 HNRNPH1P31943 449 aaKnown RBP12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 FXR1P51114 621 aaKnown RBP eCLIP12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 KCNB1Q14721 858 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 MORF4L2Q15014 288 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 LRRC36Q1X8D7 754 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 P3H1Q32P28 736 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 HEATR6Q6AI08 1181 aaKnown RBP12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 TTC8Q8TAM2 541 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 CYFIP2Q96F07 1278 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 KIAA1586Q9HCI6 787 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 PARVAQ9NVD7 372 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 FEM1BQ9UK73 627 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 FAM95CA0A1B0GW59 222 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 SRGNP10124 158 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 KIAA1755Q5JYT7 1200 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 BTBD8Q5XKL5 378 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 VPS39Q96JC1 886 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 TFR2Q9UP52 801 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 NBPF26B4DH59 902 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 CCDC22O60826 627 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 TBXAS1P24557 533 aaPredicted RBP12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 LSP1P33241 339 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 IMPG1Q17R60 797 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 OLFML2BQ68BL8 750 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 GPD1LQ8N335 351 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 KIF2BQ8N4N8 673 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 TC2NQ8N9U0 490 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 SLC30A5Q8TAD4 765 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 ZIM3Q96PE6 472 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 ZNF302Q9NR11 478 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 TMEM39AQ9NV64 488 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 PSD3Q9NYI0 1048 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 MADDQ8WXG6 1647 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 PSMD14O00487 310 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 CETPP11597 493 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 ADORA2BP29275 332 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 NMT1P30419 496 aaKnown RBP12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 LMBRD2Q68DH5 695 aaPredicted RBP12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 RCSD1Q6JBY9 416 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 PHF20Q9BVI0 1012 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 PALMDQ9NP74 551 aa12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 STX18Q9P2W9 335 aaKnown RBP12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 USP15Q9Y4E8 981 aaPredicted RBP12.64□□□□□ -0.39
PCDHA9-201ENST00000378122 RAD51CO43502 376 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 SWSAP1Q6NVH7 229 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 FAM20AQ96MK3 541 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 RNF208Q9H0X6 261 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 COL15A1P39059 1388 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 FOXP4Q8IVH2 680 aaPredicted RBP12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 EDEM3Q9BZQ6 932 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 ZC4H2Q9NQZ6 224 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 RNF146Q9NTX7 359 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 ABCA6Q8N139 1617 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 DAB2P98082 770 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 ORC2Q13416 577 aaPredicted RBP12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 MXD4Q14582 209 aaPredicted RBP12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 ALX1Q15699 326 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 CYFIP1Q7L576 1253 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 SCG3Q8WXD2 468 aaKnown RBP12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 CPA5Q8WXQ8 436 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 SH3KBP1Q96B97 665 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 MAP3K20Q9NYL2 800 aaKnown RBP12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 ABCC3O15438 1527 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 APOL1O14791 398 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 CATSPER3Q86XQ3 398 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 XPO6Q96QU8 1125 aaKnown RBP12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 GABBR1Q9UBS5 961 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 LZTS1Q9Y250 596 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 CORO7P57737 925 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 TNFAIP2Q03169 654 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 STAT4Q14765 748 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 HIF1AQ16665 826 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 TSGA10IPQ3SY00 556 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 AGBL2Q5U5Z8 902 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 DDIASQ8IXT1 998 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 FHDC1Q9C0D6 1143 aaPredicted RBP12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 NARFQ9UHQ1 456 aa12.63□□□□□ -0.39
PCDHA9-201ENST00000378122 PRPF4O43172 522 aaKnown RBP eCLIP12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 HDAC4P56524 1084 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 SEPT5Q99719 369 aaPredicted RBP12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 REREQ9P2R6 1566 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 ASAP2O43150 1006 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 KRT7P08729 469 aa12.62□□□□□ -0.39
PCDHA9-201ENST00000378122 DNAJB2P25686 324 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms