RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 DTX3LQ8TDB6 740 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 TUBB6Q9BUF5 446 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 DONSONQ9NYP3 566 aa17.19■□□□□ 0.34
RGP1-201ENST00000378078 MAST1Q9Y2H9 1570 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 KRT38O76015 456 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 TMEM60Q9H2L4 133 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 GPBP1L1Q9HC44 474 aaPredicted RBP17.18■□□□□ 0.34
RGP1-201ENST00000378078 BSDC1Q9NW68 430 aaPredicted RBP17.18■□□□□ 0.34
RGP1-201ENST00000378078 CFAP43Q8NDM7 1665 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 RPS6KA5O75582 802 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 ALDH1A2O94788 518 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 APRTP07741 180 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 GYS1P13807 737 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 SP100P23497 879 aaPredicted RBP17.18■□□□□ 0.34
RGP1-201ENST00000378078 PLEKHA8Q96JA3 519 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 PRR12Q9ULL5 1215 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 HMGXB3Q12766 1538 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 AKAP10O43572 662 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 HNRNPCP07910 306 aaKnown RBP eCLIP17.18■□□□□ 0.34
RGP1-201ENST00000378078 YY1P25490 414 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 MLH1P40692 756 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 PLCL1Q15111 1095 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 CEP78Q5JTW2 689 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 DEFB128Q7Z7B8 93 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 PPP2R3CQ969Q6 453 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 ACAD9Q9H845 621 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 IPO5O00410 1097 aaKnown RBP17.18■□□□□ 0.34
RGP1-201ENST00000378078 ANGPT2O15123 496 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 PARNO95453 639 aaKnown RBP17.18■□□□□ 0.34
RGP1-201ENST00000378078 KRT4P19013 534 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 CCNE1P24864 410 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 DIS3LQ8TF46 1054 aaKnown RBP17.18■□□□□ 0.34
RGP1-201ENST00000378078 TDP2O95551 362 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 MRPS15P82914 257 aaKnown RBP17.18■□□□□ 0.34
RGP1-201ENST00000378078 PHKG1Q16816 387 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 ITPRIPL1Q6GPH6 555 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 CCDC81Q6ZN84 652 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 TBC1D10CQ8IV04 446 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 FOXP4Q8IVH2 680 aaPredicted RBP17.18■□□□□ 0.34
RGP1-201ENST00000378078 MCEEQ96PE7 176 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 CNOT10Q9H9A5 744 aaKnown RBP17.18■□□□□ 0.34
RGP1-201ENST00000378078 ZNF556Q9HAH1 456 aa17.18■□□□□ 0.34
RGP1-201ENST00000378078 NMT1P30419 496 aaKnown RBP17.17■□□□□ 0.34
RGP1-201ENST00000378078 QARSP47897 775 aaKnown RBP17.17■□□□□ 0.34
RGP1-201ENST00000378078 CYP4A22Q5TCH4 519 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 ZNF555Q8NEP9 628 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 SPACA7Q96KW9 195 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 ARHGEF38Q9NXL2 777 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 CHORDC1Q9UHD1 332 aaPredicted RBP17.17■□□□□ 0.34
RGP1-201ENST00000378078 CYP7B1O75881 506 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 EPC1Q9H2F5 836 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 KDM1AO60341 852 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 GGCXP38435 758 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 ACTN3Q08043 901 aaPredicted RBP17.17■□□□□ 0.34
RGP1-201ENST00000378078 RALGDSQ12967 914 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 CARNMT1Q8N4J0 409 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 SH3TC2Q8TF17 1288 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 SPATS2LQ9NUQ6 558 aaKnown RBP17.17■□□□□ 0.34
RGP1-201ENST00000378078 PCDHB8Q9UN66 801 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 PLA2G4FQ68DD2 849 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 PODNQ7Z5L7 613 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 CLEC10AQ8IUN9 316 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 SPIRE2Q8WWL2 714 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 ASCC2Q9H1I8 757 aaPredicted RBP17.17■□□□□ 0.34
RGP1-201ENST00000378078 SMARCAD1Q9H4L7 1026 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 C20orf96Q9NUD7 363 aaPredicted RBP17.17■□□□□ 0.34
RGP1-201ENST00000378078 SCARF1Q14162 830 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 PLD3Q8IV08 490 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 CYP27B1O15528 508 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 NEK2P51955 445 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 DDX39BQ13838 428 aaKnown RBP17.17■□□□□ 0.34
RGP1-201ENST00000378078 CDR2LQ86X02 465 aaPredicted RBP17.17■□□□□ 0.34
RGP1-201ENST00000378078 DDX42Q86XP3 938 aaKnown RBP eCLIP17.17■□□□□ 0.34
RGP1-201ENST00000378078 TSC22D3Q99576 134 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 PIF1Q9H611 641 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 NPHS2Q9NP85 383 aa17.17■□□□□ 0.34
RGP1-201ENST00000378078 PCNAP12004 261 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 CHRM3P20309 590 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 WDR72Q3MJ13 1102 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 AGBL1Q96MI9 1066 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 C2orf40Q9H1Z8 148 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 MINPP1Q9UNW1 487 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 AP2B1P63010 937 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 APBA1Q02410 837 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 RCSD1Q6JBY9 416 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 BCL2L14Q9BZR8 327 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 TASP1Q9H6P5 420 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 CCDC151A5D8V7 595 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 KRT8P05787 483 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 ITGA4P13612 1032 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 CASP8Q14790 479 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 GLRA4Q5JXX5 417 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 PTPRN2Q92932 1015 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 TSEN34Q9BSV6 310 aaKnown RBP17.16■□□□□ 0.34
RGP1-201ENST00000378078 ZFYVE28Q9HCC9 887 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 NDE1Q9NXR1 346 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 ABCC10Q5T3U5 1492 aa17.16■□□□□ 0.34
RGP1-201ENST00000378078 A0A087WUV0 522 aaPredicted RBP17.16■□□□□ 0.34
RGP1-201ENST00000378078 EEF2KO00418 725 aaKnown RBP17.16■□□□□ 0.34
RGP1-201ENST00000378078 IZUMO3Q5VZ72 239 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms