RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 RBAK-RBAKDNI3L0D1 243 aa9.27□□□□□ -0.92
PCDH9-202ENST00000377865 PPIP5K2O43314 1243 aa9.27□□□□□ -0.92
PCDH9-202ENST00000377865 ACAD10Q6JQN1 1059 aa9.27□□□□□ -0.92
PCDH9-202ENST00000377865 LVRNQ6Q4G3 990 aa9.27□□□□□ -0.92
PCDH9-202ENST00000377865 ZNF572Q7Z3I7 529 aaPredicted RBP9.27□□□□□ -0.92
PCDH9-202ENST00000377865 VGLL2Q8N8G2 317 aa9.27□□□□□ -0.92
PCDH9-202ENST00000377865 FLAD1Q8NFF5 587 aa9.27□□□□□ -0.92
PCDH9-202ENST00000377865 SCFD1Q8WVM8 642 aa9.27□□□□□ -0.92
PCDH9-202ENST00000377865 MANSC1Q9H8J5 431 aa9.27□□□□□ -0.92
PCDH9-202ENST00000377865 SRP68Q9UHB9 627 aaKnown RBP9.27□□□□□ -0.92
PCDH9-202ENST00000377865 SERPINB9P50453 376 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 NOP14P78316 857 aaKnown RBP9.27□□□□□ -0.93
PCDH9-202ENST00000377865 GPSM2P81274 684 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 COL9A3Q14050 684 aaPredicted RBP9.27□□□□□ -0.93
PCDH9-202ENST00000377865 Q4G0T1 1027 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 ZC3H15Q8WU90 426 aaKnown RBP9.27□□□□□ -0.93
PCDH9-202ENST00000377865 ABTB1Q969K4 478 aaPredicted RBP9.27□□□□□ -0.93
PCDH9-202ENST00000377865 UPF3AQ9H1J1 476 aaKnown RBP9.27□□□□□ -0.93
PCDH9-202ENST00000377865 CDC42EP4Q9H3Q1 356 aaKnown RBP9.27□□□□□ -0.93
PCDH9-202ENST00000377865 MCM8Q9UJA3 840 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 TRPA1O75762 1119 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 MED21Q13503 144 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 NT5DC3Q86UY8 548 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 RHPN2Q8IUC4 686 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 DHX38Q92620 1227 aaKnown RBP9.27□□□□□ -0.93
PCDH9-202ENST00000377865 FAM213AQ9BRX8 229 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 NCANO14594 1321 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 KLHL2O95198 593 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 HSPA8P11142 646 aaKnown RBP9.27□□□□□ -0.93
PCDH9-202ENST00000377865 PYGBP11216 843 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 PDE1CQ14123 709 aaPredicted RBP9.27□□□□□ -0.93
PCDH9-202ENST00000377865 GIT2Q14161 759 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 PIGHQ14442 188 aaPredicted RBP9.27□□□□□ -0.93
PCDH9-202ENST00000377865 ERMARDQ5T6L9 678 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 OR6B2Q6IFH4 312 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 GJB7Q6PEY0 223 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 RASSF3Q86WH2 238 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 PASD1Q8IV76 773 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 PNMA5Q96PV4 448 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 TTC1Q99614 292 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 UBXN6Q9BZV1 441 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 SMYD3Q9H7B4 428 aa9.27□□□□□ -0.93
PCDH9-202ENST00000377865 CD58P19256 250 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 OSBPP22059 807 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 TARSP26639 723 aaKnown RBP9.26□□□□□ -0.93
PCDH9-202ENST00000377865 CNGA1P29973 690 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 PRKCIP41743 596 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 KCNMA1Q12791 1236 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 POTEAQ6S8J7 498 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 LARGE2Q8N3Y3 721 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 TEKT4Q8WW24 435 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 EHD4Q9H223 541 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 TOPAZ1Q8N9V7 1692 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 RCCD1A6NED2 376 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 ZSCAN5CA6NGD5 496 aaPredicted RBP9.26□□□□□ -0.93
PCDH9-202ENST00000377865 LIN7AO14910 233 aaPredicted RBP9.26□□□□□ -0.93
PCDH9-202ENST00000377865 PTPN4P29074 926 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 DSG1Q02413 1049 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 FAM47CQ5HY64 1035 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 TTC39BQ5VTQ0 682 aaPredicted RBP9.26□□□□□ -0.93
PCDH9-202ENST00000377865 DCAF15Q66K64 600 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 RAB44Q7Z6P3 723 aaPredicted RBP9.26□□□□□ -0.93
PCDH9-202ENST00000377865 PPM1NQ8N819 430 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 NDUFA13Q9P0J0 144 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 GPR75-ASB3A0A0A6YYF3 556 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 K7ERI5 159 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 ENO1P06733 434 aaKnown RBP9.26□□□□□ -0.93
PCDH9-202ENST00000377865 MTERF2Q49AM1 385 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 TBC1D10BQ4KMP7 808 aaPredicted RBP9.26□□□□□ -0.93
PCDH9-202ENST00000377865 CEP55Q53EZ4 464 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 LACTB2Q53H82 288 aaPredicted RBP9.26□□□□□ -0.93
PCDH9-202ENST00000377865 ADGRA1Q86SQ6 560 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 FBXO25Q8TCJ0 367 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 NRBF2Q96F24 287 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 C9orf72Q96LT7 481 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 GPR101Q96P66 508 aaPredicted RBP9.26□□□□□ -0.93
PCDH9-202ENST00000377865 AGPAT3Q9NRZ7 376 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 SLC24A2Q9UI40 661 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 DCCP43146 1447 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 CCDC195A0A1B0GUA6 201 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 F5H6K3 240 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 NUDT17P0C025 328 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 NPR1P16066 1061 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 RANBP1P43487 201 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 KLRC3Q07444 240 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 PPIL6Q8IXY8 311 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 C4orf33Q8N1A6 199 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 MIEF2Q96C03 454 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 FRMD8Q9BZ67 464 aaPredicted RBP9.26□□□□□ -0.93
PCDH9-202ENST00000377865 RIOX1Q9H6W3 641 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 KIF9Q9HAQ2 790 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 RGL1Q9NZL6 768 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 DLGAP2Q9P1A6 1054 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 WFS1O76024 890 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 GH2P01242 217 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 KITP10721 976 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 GTF2H1P32780 548 aa9.26□□□□□ -0.93
PCDH9-202ENST00000377865 ZNF200P98182 395 aaPredicted RBP9.26□□□□□ -0.93
PCDH9-202ENST00000377865 TFAMQ00059 246 aaKnown RBP9.26□□□□□ -0.93
PCDH9-202ENST00000377865 TAF1BQ53T94 588 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms