RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 ATRNL1Q5VV63 1379 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 F5H423 210 aaPredicted RBP9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 CCNE2O96020 404 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 SPOPLQ6IQ16 392 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 LRRC31Q6UY01 552 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 SRGAP1Q7Z6B7 1085 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 SIAH1Q8IUQ4 282 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 SKA2Q8WVK7 121 aaPredicted RBP9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 CLEC4DQ8WXI8 215 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 IFT122Q9HBG6 1241 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 AGPAT5Q9NUQ2 364 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 RNF186Q9NXI6 227 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 FEZ2Q9UHY8 353 aaPredicted RBP9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 PCDHA13Q9Y5I0 950 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 FHOD1Q9Y613 1164 aa9.02□□□□□ -0.97
CRNKL1-202ENST00000377340 A0A087X0B3 334 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 EIF3DO15371 548 aaKnown RBP eCLIP9.01□□□□□ -0.971e-7■□□□□ 8.6
CRNKL1-202ENST00000377340 HOXA2O43364 376 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 PLA2G6O60733 806 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 LRG1P02750 347 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 UCHL3P15374 230 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 MAP2K2P36507 400 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 RECQLP46063 649 aaPredicted RBP9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 HSD17B4P51659 736 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 TSTA3Q13630 321 aaPredicted RBP9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 TRIP13Q15645 432 aaPredicted RBP9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 SLC27A1Q6PCB7 646 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 MIB1Q86YT6 1006 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 DNAAF3Q8N9W5 541 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 ASAP3Q8TDY4 903 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 C12orf42Q96LP6 360 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 MTMR9Q96QG7 549 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 RSAD1Q9HA92 442 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 APEX2Q9UBZ4 518 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 GABRQQ9UN88 632 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 ST3GAL5Q9UNP4 418 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 I3L4J1 428 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 ACKR2O00590 384 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 NEMP1O14524 444 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 GUCY2CP25092 1073 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 KLK7P49862 253 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 SCNN1GP51170 649 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 MYL6P60660 151 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 GEN1Q17RS7 908 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 DCP1BQ8IZD4 617 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 CNPY4Q8N129 248 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 TAS1R2Q8TE23 839 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 C18orf8Q96DM3 657 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 CELF4Q9BZC1 486 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 NIF3L1Q9GZT8 377 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 DHX35Q9H5Z1 703 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 VPS37BQ9H9H4 285 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 KCNMB3Q9NPA1 279 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 BLOC1S4Q9NUP1 217 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 DDX20Q9UHI6 824 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 IGKV6D-41A0A0C4DH26 115 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 GOLGA8CPA6NN73 597 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 AKAP3O75969 853 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 RECQL4O94761 1208 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 CD44P16070 742 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 MAN1A1P33908 653 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 ETF1P62495 437 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 ANO5Q75V66 913 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 GLIS3Q8NEA6 775 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 TMEM8AQ9HCN3 771 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 DBR1Q9UK59 544 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 SLC8A2Q9UPR5 921 aa9.01□□□□□ -0.97
CRNKL1-202ENST00000377340 LRRC37A3O60309 1634 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 VGLL3A8MV65 326 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 AMHP03971 560 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 TUBB4AP04350 444 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 CKMP06732 381 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 RALAP11233 206 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 MLH1P40692 756 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 MRPS25P82663 173 aaKnown RBP9□□□□□ -0.97
CRNKL1-202ENST00000377340 LEKR1Q6ZMV7 388 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 TRAPPC11Q7Z392 1133 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 NPLOC4Q8TAT6 608 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 GDAP1Q8TB36 358 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 GPR20Q99678 358 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 APOL5Q9BWW9 433 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 XRN2Q9H0D6 950 aaKnown RBP eCLIP9□□□□□ -0.97
CRNKL1-202ENST00000377340 TRPV6Q9H1D0 765 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 CYP4F11Q9HBI6 524 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 TRMT13Q9NUP7 481 aaKnown RBP9□□□□□ -0.97
CRNKL1-202ENST00000377340 LMCD1Q9NZU5 365 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 B4GALT5O43286 388 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 APOEP02649 317 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 MMP3P08254 477 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 GLRA2P23416 452 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 GTF2H1P32780 548 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 SOX5P35711 763 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 DARS2Q6PI48 645 aaKnown RBP9□□□□□ -0.97
CRNKL1-202ENST00000377340 FAM84AQ96KN4 292 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 SLITRK1Q96PX8 696 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 SELENOSQ9BQE4 189 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 BCAS3Q9H6U6 928 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 MOSPD1Q9UJG1 213 aa9□□□□□ -0.97
CRNKL1-202ENST00000377340 ACRP10323 421 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms