RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 APOBEC2Q9Y235 224 aaKnown RBP14.39□□□□□ -0.11
GPC6-201ENST00000377047 NOTUMQ6P988 496 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 RBBP8NLQ8NC74 664 aaPredicted RBP14.39□□□□□ -0.11
GPC6-201ENST00000377047 TRPA1O75762 1119 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 PDGFRAP16234 1089 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 RPS6P62753 249 aaKnown RBP14.39□□□□□ -0.11
GPC6-201ENST00000377047 SYCP2LQ5T4T6 812 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 TRIM55Q9BYV6 548 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 SLC13A1Q9BZW2 595 aa14.39□□□□□ -0.11
GPC6-201ENST00000377047 ALDH1A3P47895 512 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 ARSEP51690 589 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 PRMT6Q96LA8 375 aaPredicted RBP14.38□□□□□ -0.11
GPC6-201ENST00000377047 PRMT7Q9NVM4 692 aaPredicted RBP14.38□□□□□ -0.11
GPC6-201ENST00000377047 POLLQ9UGP5 575 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 DLC1Q96QB1 1528 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 MAFGO15525 162 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 GYS1P13807 737 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 EEF1B2P24534 225 aaKnown RBP14.38□□□□□ -0.11
GPC6-201ENST00000377047 KRT17Q04695 432 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 ATPAF2Q8N5M1 289 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 AGAP3Q96P47 875 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 C7orf25Q9BPX7 421 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 COG4Q9H9E3 785 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 CASS4Q9NQ75 786 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 EHD2Q9NZN4 543 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 SYTL3Q4VX76 610 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 FASTKD1Q53R41 847 aaKnown RBP14.38□□□□□ -0.11
GPC6-201ENST00000377047 GSPT2Q8IYD1 628 aaKnown RBP14.38□□□□□ -0.11
GPC6-201ENST00000377047 ANO9A1A5B4 782 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 FMO5P49326 533 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 CLCN6P51797 869 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 NLRP11P59045 1033 aaKnown RBP14.38□□□□□ -0.11
GPC6-201ENST00000377047 IZUMO3Q5VZ72 239 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 METTL16Q86W50 562 aaKnown RBP14.38□□□□□ -0.11
GPC6-201ENST00000377047 MYMKA6NI61 221 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 MMEP08473 750 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 PLEKHH3Q7Z736 793 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 MCEEQ96PE7 176 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 MTFR1LQ9H019 292 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 PIK3C2BO00750 1634 aa14.38□□□□□ -0.11
GPC6-201ENST00000377047 GRAP2O75791 330 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 SYT2Q8N9I0 419 aaPredicted RBP14.37□□□□□ -0.11
GPC6-201ENST00000377047 RIT2Q99578 217 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.37□□□□□ -0.11
GPC6-201ENST00000377047 DIP2CQ9Y2E4 1556 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 MYO1DO94832 1006 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 CAP2P40123 477 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 FSCBQ5H9T9 825 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 LZICQ8WZA0 190 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 ELAC2Q9BQ52 826 aaKnown RBP14.37□□□□□ -0.11
GPC6-201ENST00000377047 FBXO28Q9NVF7 368 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 HDAC6Q9UBN7 1215 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 DOLKQ9UPQ8 538 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 FAM47EQ6ZV65 393 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 HIPK4Q8NE63 616 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 NT5C1AQ9BXI3 368 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 SENP2Q9HC62 589 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 CNTNAP5Q8WYK1 1306 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 A0A1W2PQC6 194 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 GRID2IPA4D2P6 1211 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 ICAM1P05362 532 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 PCSK1P29120 753 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 MMS22LQ6ZRQ5 1243 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 PABPC5Q96DU9 382 aaKnown RBP14.37□□□□□ -0.11
GPC6-201ENST00000377047 PRG3Q9Y2Y8 225 aaPredicted RBP14.37□□□□□ -0.11
GPC6-201ENST00000377047 CPS1P31327 1500 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 EEF2KO00418 725 aaKnown RBP14.37□□□□□ -0.11
GPC6-201ENST00000377047 SLC1A1P43005 524 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 SESN2P58004 480 aaPredicted RBP14.37□□□□□ -0.11
GPC6-201ENST00000377047 SENP7Q9BQF6 1050 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 STK33Q9BYT3 514 aa14.37□□□□□ -0.11
GPC6-201ENST00000377047 PPFIA2O75334 1257 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 VCPP55072 806 aaKnown RBP14.36□□□□□ -0.11
GPC6-201ENST00000377047 NR1H3Q13133 447 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 GOLGA7BQ2TAP0 167 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 AIPL1Q9NZN9 384 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 CAPN11Q9UMQ6 739 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 CLCA2Q9UQC9 943 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 IGSF9BQ9UPX0 1349 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 AKT1P31749 480 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 ALDH7A1P49419 539 aaKnown RBP14.36□□□□□ -0.11
GPC6-201ENST00000377047 DEUP1Q05D60 604 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 TBCCQ15814 346 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 XRRA1Q6P2D8 792 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 DDIASQ8IXT1 998 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 SLC7A14Q8TBB6 771 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 UNC45AQ9H3U1 944 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 KLK14Q9P0G3 267 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 MAD2L2Q9UI95 211 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 PXDNLA1KZ92 1463 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 SLC26A4O43511 780 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 HLA-DRAP01903 254 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 LRG1P02750 347 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 WEE2P0C1S8 567 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 TGFB2P61812 414 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 RIMS1Q86UR5 1692 aaKnown RBP14.36□□□□□ -0.11
GPC6-201ENST00000377047 ATP11CQ8NB49 1132 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 UBA3Q8TBC4 463 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 MLXIPLQ9NP71 852 aa14.36□□□□□ -0.11
GPC6-201ENST00000377047 PTPRMP28827 1452 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms