RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 CDT1Q9H211 546 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 SNX12Q9UMY4 172 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 TNFSF13BQ9Y275 285 aa13.91□□□□□ -0.18
TRIM40-206ENST00000376724 CTAGE15A4D2H0 777 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 MMEP08473 750 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 CTAGE8P0CG41 777 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 FGFR4P22455 802 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 PSMC4P43686 418 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 TFAMQ00059 246 aaKnown RBP13.9□□□□□ -0.18
TRIM40-206ENST00000376724 GCNT1Q02742 428 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 POU5F1BQ06416 359 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 NCOA4Q13772 614 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 PTPROQ16827 1216 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 KIZQ2M2Z5 673 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 CTAGE6Q86UF2 777 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 WDR49Q8IV35 697 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 CTAGE4Q8IX94 777 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 CAGE1Q8TC20 777 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 GOLPH3Q9H4A6 298 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 PACSIN2Q9UNF0 486 aaPredicted RBP13.9□□□□□ -0.18
TRIM40-206ENST00000376724 GRID2IPA4D2P6 1211 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 RRN3P2A6NIE6 340 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 BTNL10A8MVZ5 291 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 GPR25O00155 361 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 KIF3CO14782 793 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 F2P00734 622 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 CST3P01034 146 aaPredicted RBP13.9□□□□□ -0.18
TRIM40-206ENST00000376724 CXCL8P10145 99 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 CYP11B1P15538 503 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 CPT1AP50416 773 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 PDE6CP51160 858 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 MFSD10Q14728 455 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 AMHR2Q16671 573 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 RSRC2Q7L4I2 434 aaKnown RBP13.9□□□□□ -0.18
TRIM40-206ENST00000376724 ENOSF1Q7L5Y1 443 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 CTNNBL1Q8WYA6 563 aaPredicted RBP13.9□□□□□ -0.18
TRIM40-206ENST00000376724 MMS19Q96T76 1030 aa13.9□□□□□ -0.18
TRIM40-206ENST00000376724 APOBEC3GQ9HC16 384 aaKnown RBP13.9□□□□□ -0.18
TRIM40-206ENST00000376724 NOCTQ9UK39 431 aaKnown RBP13.9□□□□□ -0.18
TRIM40-206ENST00000376724 KAT6AQ92794 2004 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 ERLIN2O94905 339 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 CHRNB2P17787 502 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 ARF4P18085 180 aaPredicted RBP13.89□□□□□ -0.19
TRIM40-206ENST00000376724 NOP14P78316 857 aaKnown RBP13.89□□□□□ -0.19
TRIM40-206ENST00000376724 FAM187BQ17R55 369 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 DUOXA2Q1HG44 320 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 PDCL2Q8N4E4 241 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 COG1Q8WTW3 980 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 OSBPL9Q96SU4 736 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 PCDHB18PQ96TA0 734 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 TLR10Q9BXR5 811 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 IMPG2Q9BZV3 1241 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 THAP2Q9H0W7 228 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 PDZD7Q9H5P4 517 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 RPF1Q9H9Y2 349 aaKnown RBP13.89□□□□□ -0.19
TRIM40-206ENST00000376724 INTUQ9ULD6 942 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 GABRQQ9UN88 632 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 NUB1Q9Y5A7 615 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 PCDHGC5Q9Y5F6 944 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 UMODL1Q5DID0 1318 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 NRCAMQ92823 1304 aa13.89□□□□□ -0.19
TRIM40-206ENST00000376724 FTLP02792 175 aaPredicted RBP13.88□□□□□ -0.19
TRIM40-206ENST00000376724 TMEM191BP0C7N4 346 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 CYP2C9P11712 490 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 PSEN2P49810 448 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 FCGRTP55899 365 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 IRF5Q13568 498 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 CUL2Q13617 745 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 SURF1Q15526 300 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 IFI16Q16666 785 aaKnown RBP13.88□□□□□ -0.19
TRIM40-206ENST00000376724 IFNLR1Q8IU57 520 aaPredicted RBP13.88□□□□□ -0.19
TRIM40-206ENST00000376724 SLC35G2Q8TBE7 412 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 ARHGEF26Q96DR7 871 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 OSGEPQ9NPF4 335 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 HYOU1Q9Y4L1 999 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 AOC2O75106 756 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 TMEM253P0C7T8 217 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 STAG3L1P0CL83 205 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 AP3M2P53677 418 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 ZNF200P98182 395 aaPredicted RBP13.88□□□□□ -0.19
TRIM40-206ENST00000376724 FMO1Q01740 532 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 TRPC3Q13507 836 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 HIC1Q14526 733 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 RUFY4Q6ZNE9 571 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 EFCAB13Q8IY85 973 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 TPCN2Q8NHX9 752 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 FAM81BQ96LP2 452 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 PCDHB4Q9Y5E5 795 aa13.88□□□□□ -0.19
TRIM40-206ENST00000376724 ANKRD62A6NC57 917 aa13.87□□□□□ -0.19
TRIM40-206ENST00000376724 TSPAN1O60635 241 aa13.87□□□□□ -0.19
TRIM40-206ENST00000376724 CLTAP09496 248 aa13.87□□□□□ -0.19
TRIM40-206ENST00000376724 C6orf222P0C671 652 aaPredicted RBP13.87□□□□□ -0.19
TRIM40-206ENST00000376724 AKR1A1P14550 325 aa13.87□□□□□ -0.19
TRIM40-206ENST00000376724 TCP1P17987 556 aaKnown RBP13.87□□□□□ -0.19
TRIM40-206ENST00000376724 MYL6P60660 151 aa13.87□□□□□ -0.19
TRIM40-206ENST00000376724 CDR2Q01850 454 aa13.87□□□□□ -0.19
TRIM40-206ENST00000376724 FSCN1Q16658 493 aaKnown RBP13.87□□□□□ -0.19
TRIM40-206ENST00000376724 MEI1Q5TIA1 1274 aa13.87□□□□□ -0.19
TRIM40-206ENST00000376724 FBXO38Q6PIJ6 1188 aa13.87□□□□□ -0.19
TRIM40-206ENST00000376724 TMEM270Q6UE05 265 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms