RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ATP5OP48047 213 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 RFX6Q8HWS3 928 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 SEMA4DQ92854 862 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 STMN2Q93045 179 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 SPDL1Q96EA4 605 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 INO80BQ9C086 356 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 C12orf65Q9H3J6 166 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 SLCO1B3Q9NPD5 702 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 SUFUQ9UMX1 484 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 ANP32DO95626 131 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 AUHQ13825 339 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 KRT27Q7Z3Y8 459 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 LRRN4Q8WUT4 740 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 MAML1Q92585 1016 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 ZBTB45Q96K62 511 aaPredicted RBP15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 MCEEQ96PE7 176 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 LRRC37BQ96QE4 947 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 TARS2Q9BW92 718 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 POLRMTO00411 1230 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 ATP9AO75110 1047 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 TNFRSF8P28908 595 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 NPTX2P47972 431 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 DRP2Q13474 957 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 COBLL1Q53SF7 1204 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 ERMARDQ5T6L9 678 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 EXOC3L1Q86VI1 746 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 LENG9Q96B70 501 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 ZDHHC15Q96MV8 337 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 MKNK1Q9BUB5 465 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 TRABDQ9H4I3 376 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 SLC12A6Q9UHW9 1150 aa15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 DIS3Q9Y2L1 958 aaKnown RBP15.28■□□□□ 0.04
TNFRSF1B-201ENST00000376259 SIPA1L3O60292 1781 aaPredicted RBP15.27■□□□□ 0.04
TNFRSF1B-201ENST00000376259 PFASO15067 1338 aa15.27■□□□□ 0.04
TNFRSF1B-201ENST00000376259 WDR64B1ANS9 1081 aa15.27■□□□□ 0.04
TNFRSF1B-201ENST00000376259 O00370 1275 aa15.27■□□□□ 0.04
TNFRSF1B-201ENST00000376259 GRAP2O75791 330 aa15.27■□□□□ 0.04
TNFRSF1B-201ENST00000376259 CYP3A4P08684 503 aa15.27■□□□□ 0.04
TNFRSF1B-201ENST00000376259 RARGP13631 454 aa15.27■□□□□ 0.04
TNFRSF1B-201ENST00000376259 CLUL1Q15846 466 aa15.27■□□□□ 0.04
TNFRSF1B-201ENST00000376259 STRIP1Q5VSL9 837 aa15.27■□□□□ 0.04
TNFRSF1B-201ENST00000376259 COL23A1Q86Y22 540 aaPredicted RBP15.27■□□□□ 0.04
TNFRSF1B-201ENST00000376259 CD302Q8IX05 232 aa15.27■□□□□ 0.04
TNFRSF1B-201ENST00000376259 CFAP36Q96G28 342 aa15.27■□□□□ 0.04
TNFRSF1B-201ENST00000376259 NLRP4Q96MN2 994 aa15.27■□□□□ 0.04
TNFRSF1B-201ENST00000376259 POLR3FQ9H1D9 316 aaPredicted RBP15.27■□□□□ 0.04
TNFRSF1B-201ENST00000376259 RNF146Q9NTX7 359 aa15.27■□□□□ 0.04
TNFRSF1B-201ENST00000376259 NOP53Q9NZM5 478 aaKnown RBP15.27■□□□□ 0.04
TNFRSF1B-201ENST00000376259 R3HDM2Q9Y2K5 976 aaKnown RBP15.27■□□□□ 0.04
TNFRSF1B-201ENST00000376259 TRPM3Q9HCF6 1732 aaPredicted RBP15.27■□□□□ 0.04
TNFRSF1B-201ENST00000376259 CSDE1O75534 798 aaKnown RBP15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 MTMR2Q13614 643 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ATL2Q8NHH9 583 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 TMEM121Q9BTD3 319 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 G3BP2Q9UN86 482 aaKnown RBP15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 NAALADL1Q9UQQ1 740 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 NEU2Q9Y3R4 380 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 HEY1Q9Y5J3 304 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 NUP188Q5SRE5 1749 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 E2F8A0AVK6 867 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PSMD10O75832 226 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 HLA-DRAP01903 254 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 TMEM191BP0C7N4 346 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 MAGEA4P43358 317 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 SPIRE1Q08AE8 756 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 SLC27A3Q5K4L6 730 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 FAXCQ5TGI0 409 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 SNRNP48Q6IEG0 339 aaKnown RBP15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 MCF2L2Q86YR7 1114 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 RHPN2Q8IUC4 686 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 SLC13A1Q9BZW2 595 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 UBN1Q9NPG3 1134 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 RBAKQ9NYW8 714 aaPredicted RBP15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ROBO3Q96MS0 1386 aa15.27■□□□□ 0.03
TNFRSF1B-201ENST00000376259 STAM2O75886 525 aa15.26■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ALDH5A1P51649 535 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF1B-201ENST00000376259 RRP1BQ14684 758 aaKnown RBP15.26■□□□□ 0.03
TNFRSF1B-201ENST00000376259 UGCGQ16739 394 aa15.26■□□□□ 0.03
TNFRSF1B-201ENST00000376259 MAIP1Q8WWC4 291 aa15.26■□□□□ 0.03
TNFRSF1B-201ENST00000376259 SLC7A3Q8WY07 619 aa15.26■□□□□ 0.03
TNFRSF1B-201ENST00000376259 KREMEN1Q96MU8 473 aa15.26■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PICK1Q9NRD5 415 aa15.26■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PDE4DIPQ5VU43 2346 aa15.26■□□□□ 0.03
TNFRSF1B-201ENST00000376259 KAT6AQ92794 2004 aa15.26■□□□□ 0.03
TNFRSF1B-201ENST00000376259 GBP1P32455 592 aa15.26■□□□□ 0.03
TNFRSF1B-201ENST00000376259 GCLCP48506 637 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF1B-201ENST00000376259 RAD23BP54727 409 aa15.26■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PSMC5P62195 406 aa15.26■□□□□ 0.03
TNFRSF1B-201ENST00000376259 SUGP1Q8IWZ8 645 aaKnown RBP15.26■□□□□ 0.03
TNFRSF1B-201ENST00000376259 TBX20Q9UMR3 447 aa15.26■□□□□ 0.03
TNFRSF1B-201ENST00000376259 A0A0A6YYK5 440 aaPredicted RBP15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 KDM4FA0A1W2PPD8 638 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ATP6V1G2O95670 118 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ASNSP08243 561 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 TROVE2P10155 538 aaKnown RBP eCLIP15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 TKFCQ3LXA3 575 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 NIM1KQ8IY84 436 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ATP6V0A1Q93050 837 aa15.25■□□□□ 0.03
TNFRSF1B-201ENST00000376259 CFAP57Q96MR6 1250 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms