RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 HOXD10P28358 340 aa14.41□□□□□ -0.1
C9orf47-203ENST00000375851 GIT2Q14161 759 aa14.41□□□□□ -0.1
C9orf47-203ENST00000375851 TRIM67Q6ZTA4 783 aa14.41□□□□□ -0.1
C9orf47-203ENST00000375851 TRAPPC11Q7Z392 1133 aa14.41□□□□□ -0.1
C9orf47-203ENST00000375851 GPRC5AQ8NFJ5 357 aa14.41□□□□□ -0.1
C9orf47-203ENST00000375851 RUBCNQ92622 972 aa14.41□□□□□ -0.1
C9orf47-203ENST00000375851 EXT2Q93063 718 aa14.41□□□□□ -0.1
C9orf47-203ENST00000375851 EPS15L1Q9UBC2 864 aa14.41□□□□□ -0.1
C9orf47-203ENST00000375851 CYP2B6P20813 491 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 BACE1P56817 501 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 HIF1AQ16665 826 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 NBPF9Q3BBW0 867 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 GMCL1P1Q8NEA9 526 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 MCEEQ96PE7 176 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 SEMA6BQ9H3T3 888 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 CACYBPQ9HB71 228 aaKnown RBP14.4□□□□□ -0.1
C9orf47-203ENST00000375851 NAGPAQ9UK23 515 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 RGL2O15211 777 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 ATMINO43313 823 aaPredicted RBP14.4□□□□□ -0.1
C9orf47-203ENST00000375851 PHF2O75151 1096 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 CASP2P42575 452 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 PAPOLAP51003 745 aaKnown RBP14.4□□□□□ -0.1
C9orf47-203ENST00000375851 TRIM65Q6PJ69 517 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 PARK7Q99497 189 aaKnown RBP14.4□□□□□ -0.1
C9orf47-203ENST00000375851 ZBED2Q9BTP6 218 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 CCL15-CCL14A0A0B4J2E2 113 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 CFLARO15519 480 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 CTSHP09668 335 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 GUCY2CP25092 1073 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 CASP4P49662 377 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 CDK17Q00537 523 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 CCL15Q16663 113 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 BTBD8Q5XKL5 378 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 CDR2LQ86X02 465 aaPredicted RBP14.4□□□□□ -0.1
C9orf47-203ENST00000375851 AFG1LQ8WV93 481 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 APOL1O14791 398 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 RPSAP08865 295 aaKnown RBP14.4□□□□□ -0.1
C9orf47-203ENST00000375851 PDGFRBP09619 1106 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 TCF7P36402 384 aaPredicted RBP14.4□□□□□ -0.1
C9orf47-203ENST00000375851 ART3Q13508 389 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 CEP120Q8N960 986 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 PDCD6IPQ8WUM4 868 aaKnown RBP14.4□□□□□ -0.1
C9orf47-203ENST00000375851 NIF3L1Q9GZT8 377 aa14.4□□□□□ -0.1
C9orf47-203ENST00000375851 CLGNO14967 610 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 ITPRIPL1Q6GPH6 555 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 APPL2Q8NEU8 664 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 SDCCAG3Q96C92 435 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 DNAJC7Q99615 494 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 TRAIPQ9BWF2 469 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 OSBPL8Q9BZF1 889 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 CHORDC1Q9UHD1 332 aaPredicted RBP14.39□□□□□ -0.11
C9orf47-203ENST00000375851 PIGHQ14442 188 aaPredicted RBP14.39□□□□□ -0.11
C9orf47-203ENST00000375851 SPON2Q9BUD6 331 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 PPP1R9AQ9ULJ8 1098 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 CYP2C9P11712 490 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 PON1P27169 355 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 PPARGP37231 505 aaPredicted RBP14.39□□□□□ -0.11
C9orf47-203ENST00000375851 OCRLQ01968 901 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 CDKAL1Q5VV42 579 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 CBWD2Q8IUF1 395 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 SCG3Q8WXD2 468 aaKnown RBP14.39□□□□□ -0.11
C9orf47-203ENST00000375851 VIPAS39Q9H9C1 493 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.39□□□□□ -0.11
C9orf47-203ENST00000375851 SLC8A2Q9UPR5 921 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 WTIPA6NIX2 430 aaPredicted RBP14.39□□□□□ -0.11
C9orf47-203ENST00000375851 FOXN3O00409 490 aaPredicted RBP14.39□□□□□ -0.11
C9orf47-203ENST00000375851 NFIBO00712 420 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 RAD51CO43502 376 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 IL18RAPO95256 599 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 TAC1P20366 129 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 MX2P20592 715 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 MUTP22033 750 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 BYSLQ13895 437 aaKnown RBP14.39□□□□□ -0.11
C9orf47-203ENST00000375851 STAT4Q14765 748 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 FAM163AQ96GL9 167 aaPredicted RBP14.39□□□□□ -0.11
C9orf47-203ENST00000375851 DCTN4Q9UJW0 460 aa14.39□□□□□ -0.11
C9orf47-203ENST00000375851 AP5Z1O43299 807 aa14.38□□□□□ -0.11
C9orf47-203ENST00000375851 CPB1P15086 417 aa14.38□□□□□ -0.11
C9orf47-203ENST00000375851 SMAD1Q15797 465 aaKnown RBP14.38□□□□□ -0.11
C9orf47-203ENST00000375851 FIGNQ5HY92 759 aa14.38□□□□□ -0.11
C9orf47-203ENST00000375851 GPAT2Q6NUI2 795 aa14.38□□□□□ -0.11
C9orf47-203ENST00000375851 SYDE1Q6ZW31 735 aaPredicted RBP14.38□□□□□ -0.11
C9orf47-203ENST00000375851 NLRP14Q86W24 1093 aa14.38□□□□□ -0.11
C9orf47-203ENST00000375851 SH2D3CQ8N5H7 860 aa14.38□□□□□ -0.11
C9orf47-203ENST00000375851 GTF3C2Q8WUA4 911 aaPredicted RBP14.38□□□□□ -0.11
C9orf47-203ENST00000375851 C9orf72Q96LT7 481 aa14.38□□□□□ -0.11
C9orf47-203ENST00000375851 RBM15Q96T37 977 aaKnown RBP eCLIP14.38□□□□□ -0.11
C9orf47-203ENST00000375851 NT5C1AQ9BXI3 368 aa14.38□□□□□ -0.11
C9orf47-203ENST00000375851 SLC13A1Q9BZW2 595 aa14.38□□□□□ -0.11
C9orf47-203ENST00000375851 MAP3K20Q9NYL2 800 aaKnown RBP14.38□□□□□ -0.11
C9orf47-203ENST00000375851 USH1CQ9Y6N9 552 aa14.38□□□□□ -0.11
C9orf47-203ENST00000375851 MYO1CO00159 1063 aa14.38□□□□□ -0.11
C9orf47-203ENST00000375851 APOEP02649 317 aa14.38□□□□□ -0.11
C9orf47-203ENST00000375851 CYP2C19P33261 490 aa14.38□□□□□ -0.11
C9orf47-203ENST00000375851 CARSP49589 748 aaKnown RBP14.38□□□□□ -0.11
C9orf47-203ENST00000375851 GUCY1A3Q02108 690 aa14.38□□□□□ -0.11
C9orf47-203ENST00000375851 USP38Q8NB14 1042 aa14.38□□□□□ -0.11
C9orf47-203ENST00000375851 SCFD1Q8WVM8 642 aa14.38□□□□□ -0.11
C9orf47-203ENST00000375851 IFT43Q96FT9 208 aa14.38□□□□□ -0.11
C9orf47-203ENST00000375851 CHMP6Q96FZ7 201 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms