RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CDR2Q01850 454 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 ZNF211Q13398 564 aaPredicted RBP14.98□□□□□ -0.01
MSH5-202ENST00000375740 EEPD1Q7L9B9 569 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 SULF1Q8IWU6 871 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 FUKQ8N0W3 1084 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 PSPC1Q8WXF1 523 aaKnown RBP14.98□□□□□ -0.01
MSH5-202ENST00000375740 ALG3Q92685 438 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 OTUD5Q96G74 571 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 CCDC114Q96M63 670 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 PAGR1Q9BTK6 254 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 HAPLN2Q9GZV7 340 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 TAF1DQ9H5J8 278 aaPredicted RBP14.98□□□□□ -0.01
MSH5-202ENST00000375740 KIAA1586Q9HCI6 787 aa14.98□□□□□ -0.01
MSH5-202ENST00000375740 AGO2Q9UKV8 859 aaKnown RBP14.98□□□□□ -0.01
MSH5-202ENST00000375740 TPX2Q9ULW0 747 aaKnown RBP14.98□□□□□ -0.01
MSH5-202ENST00000375740 ATP2C2O75185 946 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 CALCAP01258 141 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 RPSAP08865 295 aaKnown RBP14.97□□□□□ -0.01
MSH5-202ENST00000375740 HPDP32754 393 aaPredicted RBP14.97□□□□□ -0.01
MSH5-202ENST00000375740 MDH1P40925 334 aaKnown RBP14.97□□□□□ -0.01
MSH5-202ENST00000375740 NAMPTP43490 491 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 NLRP11P59045 1033 aaKnown RBP14.97□□□□□ -0.01
MSH5-202ENST00000375740 ENPEPQ07075 957 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 CYB5D1Q6P9G0 228 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 C15orf39Q6ZRI6 1047 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 DDX42Q86XP3 938 aaKnown RBP eCLIP14.97□□□□□ -0.012e-6■□□□□ 8.3
MSH5-202ENST00000375740 SLC7A3Q8WY07 619 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 DDX1Q92499 740 aaKnown RBP14.97□□□□□ -0.01
MSH5-202ENST00000375740 CARD9Q9H257 536 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 STYXL1Q9Y6J8 313 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 SBF1O95248 1867 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 KRT5P13647 590 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 EDNRBP24530 442 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 PDE6CP51160 858 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 MESDQ14696 234 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 PSMD6Q15008 389 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 QPCTQ16769 361 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 CFAP58Q5T655 872 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 C11orf63Q6NUN7 778 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 CRELD2Q6UXH1 353 aaPredicted RBP14.97□□□□□ -0.01
MSH5-202ENST00000375740 MICALCLQ6ZW33 695 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 ADAT2Q7Z6V5 191 aaKnown RBP14.97□□□□□ -0.01
MSH5-202ENST00000375740 SPATS2Q86XZ4 545 aaKnown RBP14.97□□□□□ -0.01
MSH5-202ENST00000375740 NRBP2Q9NSY0 501 aa14.97□□□□□ -0.01
MSH5-202ENST00000375740 BHMG1C9JSJ3 638 aaPredicted RBP14.96□□□□□ -0.01
MSH5-202ENST00000375740 TNNI1P19237 187 aa14.96□□□□□ -0.01
MSH5-202ENST00000375740 STAT5BP51692 787 aa14.96□□□□□ -0.01
MSH5-202ENST00000375740 CLDN10P78369 228 aa14.96□□□□□ -0.01
MSH5-202ENST00000375740 PARP9Q8IXQ6 854 aa14.96□□□□□ -0.01
MSH5-202ENST00000375740 WHAMMQ8TF30 809 aa14.96□□□□□ -0.01
MSH5-202ENST00000375740 CLMNQ96JQ2 1002 aa14.96□□□□□ -0.01
MSH5-202ENST00000375740 FNBP1Q96RU3 617 aa14.96□□□□□ -0.01
MSH5-202ENST00000375740 TARS2Q9BW92 718 aaKnown RBP14.96□□□□□ -0.01
MSH5-202ENST00000375740 SLITRK6Q9H5Y7 841 aa14.96□□□□□ -0.01
MSH5-202ENST00000375740 GRIN3BO60391 1043 aa14.96□□□□□ -0.02
MSH5-202ENST00000375740 C4BPAP04003 597 aaKnown RBP14.96□□□□□ -0.02
MSH5-202ENST00000375740 COMTP21964 271 aa14.96□□□□□ -0.02
MSH5-202ENST00000375740 HLTFQ14527 1009 aaKnown RBP eCLIP14.96□□□□□ -0.02
MSH5-202ENST00000375740 TARBP2Q15633 366 aaKnown RBP14.96□□□□□ -0.02
MSH5-202ENST00000375740 LY6KQ17RY6 165 aa14.96□□□□□ -0.02
MSH5-202ENST00000375740 AADACL2Q6P093 401 aa14.96□□□□□ -0.02
MSH5-202ENST00000375740 MOB2Q70IA6 237 aa14.96□□□□□ -0.02
MSH5-202ENST00000375740 DHX37Q8IY37 1157 aaKnown RBP14.96□□□□□ -0.02
MSH5-202ENST00000375740 CCDC26Q8TAB7 109 aa14.96□□□□□ -0.02
MSH5-202ENST00000375740 KRT35Q92764 455 aa14.96□□□□□ -0.02
MSH5-202ENST00000375740 CYFIP2Q96F07 1278 aa14.96□□□□□ -0.02
MSH5-202ENST00000375740 A0A0G2JLL6 359 aaPredicted RBP14.95□□□□□ -0.02
MSH5-202ENST00000375740 TTI1O43156 1089 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 ZC3H11AO75152 810 aaKnown RBP eCLIP14.95□□□□□ -0.02
MSH5-202ENST00000375740 MTA2O94776 668 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 FAM107AO95990 144 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 CYP1A2P05177 515 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 ECHS1P30084 290 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 IREB2P48200 963 aaKnown RBP14.95□□□□□ -0.02
MSH5-202ENST00000375740 CDR1P51861 262 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 GCNT1Q02742 428 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 SNCBQ16143 134 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 ZBTB41Q5SVQ8 909 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 MAATS1Q7Z4T9 603 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 PRRT2Q7Z6L0 340 aaPredicted RBP14.95□□□□□ -0.02
MSH5-202ENST00000375740 MREGQ8N565 214 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 BTBD6Q96KE9 485 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 TACO1Q9BSH4 297 aaKnown RBP14.95□□□□□ -0.02
MSH5-202ENST00000375740 NUP85Q9BW27 656 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 CELF4Q9BZC1 486 aaKnown RBP14.95□□□□□ -0.02
MSH5-202ENST00000375740 ASCC2Q9H1I8 757 aaPredicted RBP14.95□□□□□ -0.02
MSH5-202ENST00000375740 C1orf112Q9NSG2 853 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 A0A0G2JMZ2 1700 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 OTOFQ9HC10 1997 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 PTPRJQ12913 1337 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 CNMDO75829 334 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 GGPS1O95749 300 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 PIGRP01833 764 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 HLA-DRAP01903 254 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 EDN1P05305 212 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 TCF7P36402 384 aaPredicted RBP14.95□□□□□ -0.02
MSH5-202ENST00000375740 CUL1Q13616 776 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 ZACNQ401N2 412 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 TDRD10Q5VZ19 366 aaKnown RBP14.95□□□□□ -0.02
MSH5-202ENST00000375740 SLFN12LQ6IEE8 588 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms