RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 CBLBQ13191 982 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 BIKQ13323 160 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 MAD2L1BPQ15013 274 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-202ENST00000375405 POSTNQ15063 836 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 KLHL40Q2TBA0 621 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 AGBL2Q5U5Z8 902 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 CYP4F22Q6NT55 531 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 TRIM62Q9BVG3 475 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 ARMT1Q9H993 441 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 NLRC4Q9NPP4 1024 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 GGA2Q9UJY4 613 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 GGA1Q9UJY5 639 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 URB1O60287 2271 aaKnown RBP4.87□□□□□ -1.63
SCN1A-202ENST00000375405 ANKRD30BQ9BXX2 1392 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 STRNO43815 780 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 BCAS1O75363 584 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-202ENST00000375405 GNAT1P11488 350 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 CHKAP35790 457 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 GRIK1P39086 918 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 IFNAR2P48551 515 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 ATL3Q6DD88 541 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 FAM171BQ6P995 826 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 RABGGTAQ92696 567 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 TOP1MTQ969P6 601 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 PPP1R14BQ96C90 147 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 SPATA9Q9BWV2 254 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 TEX13AQ9BXU3 409 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-202ENST00000375405 TRIM33Q9UPN9 1127 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 NDUFB9Q9Y6M9 179 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 RTN3O95197 1032 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-202ENST00000375405 FOSL1P15407 271 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 CD58P19256 250 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 SDSP20132 328 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 SP100P23497 879 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-202ENST00000375405 CHRNA3P32297 505 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 HSPA9P38646 679 aaKnown RBP4.87□□□□□ -1.63
SCN1A-202ENST00000375405 ACTN3Q08043 901 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-202ENST00000375405 RUNX2Q13950 521 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 RABGAP1LQ5R372 815 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 GPR139Q6DWJ6 353 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 CLEC4FQ8N1N0 589 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 OTUD5Q96G74 571 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 MAGEB5Q9BZ81 275 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 NEK6Q9HC98 313 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 TBC1D22BQ9NU19 505 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 ZFATQ9P243 1243 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 FOXO3O43524 673 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 SRGAP2O75044 1071 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 PPP1R37O75864 691 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 FGFR1P11362 822 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 CTNNB1P35222 781 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 BNIP2Q12982 314 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 NCAPHQ15003 741 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 RGS9BPQ6ZS82 235 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 CCNYL1Q8N7R7 359 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 GAB3Q8WWW8 586 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 SAT2Q96F10 170 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-202ENST00000375405 ATXN7L3BQ96GX2 97 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 NUP85Q9BW27 656 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 CINPQ9BW66 212 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-202ENST00000375405 SIK2Q9H0K1 926 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 KCNN2Q9H2S1 579 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 ENAMQ9NRM1 1142 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 SOHLH2Q9NX45 425 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 EHD3Q9NZN3 535 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 TSC22D4Q9Y3Q8 395 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 KNTC1P50748 2209 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 ITIH6Q6UXX5 1313 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 HYKKA2RU49 373 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 TRIM43BA6NCK2 446 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 DBIP07108 87 aaKnown RBP4.87□□□□□ -1.63
SCN1A-202ENST00000375405 HMBSP08397 361 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 TRIM27P14373 513 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 CASP14P31944 242 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 CLK1P49759 484 aaKnown RBP4.87□□□□□ -1.63
SCN1A-202ENST00000375405 RGS7P49802 495 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 RPS6P62753 249 aaKnown RBP4.87□□□□□ -1.63
SCN1A-202ENST00000375405 OCLNQ16625 522 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 C6orf10Q5SRN2 563 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 SLC9A4Q6AI14 798 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 TYW1BQ6NUM6 668 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 CABLES1Q8TDN4 633 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 OSBP2Q969R2 916 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 TMEM87BQ96K49 555 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 PHF12Q96QT6 1004 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 SERHL2Q9H4I8 314 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 A1CFQ9NQ94 594 aaKnown RBP4.87□□□□□ -1.63
SCN1A-202ENST00000375405 SERHLQ9NQF3 203 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 FAM118AQ9NWS6 357 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 NUP50Q9UKX7 468 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 CCDC195A0A1B0GUA6 201 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 TIMM44O43615 452 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 KPNA6O60684 536 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 ANXA1P04083 346 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 ENO1P06733 434 aaKnown RBP4.87□□□□□ -1.63
SCN1A-202ENST00000375405 NUDT17P0C025 328 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 CPA1P15085 419 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 FBLN1P23142 703 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 NNTQ13423 1086 aa4.87□□□□□ -1.63
SCN1A-202ENST00000375405 CCDC153Q494R4 210 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms