RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 RBM12Q9NTZ6 932 aaKnown RBP10.72□□□□□ -0.69
PTCH1-204ENST00000375290 HPSEQ9Y251 543 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 BCAR1P56945 870 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 ROR2Q01974 943 aaKnown RBP10.72□□□□□ -0.69
PTCH1-204ENST00000375290 METTL23Q86XA0 190 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 CASP10Q92851 521 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 ZNF518BQ9C0D4 1074 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 ZNF229Q9UJW7 825 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 MYO1DO94832 1006 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 ATP6V1G2O95670 118 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 THRAP10827 490 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 STAT3P40763 770 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 ADA2Q9NZK5 511 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 BTBD7Q9P203 1132 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 HDAC6Q9UBN7 1215 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 STARD13Q9Y3M8 1113 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 FTLP02792 175 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-204ENST00000375290 RAB14P61106 215 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 ARHGAP22Q7Z5H3 698 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 TRIM54Q9BYV2 358 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 RPF1Q9H9Y2 349 aaKnown RBP10.72□□□□□ -0.69
PTCH1-204ENST00000375290 NSMFQ6X4W1 530 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 ADCK1Q86TW2 530 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 TMPRSS6Q8IU80 811 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 LCORLQ8N3X6 602 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 TIMMDC1Q9NPL8 285 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 CPSF3Q9UKF6 684 aaKnown RBP10.72□□□□□ -0.69
PTCH1-204ENST00000375290 LINC00523Q86TU6 105 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 SH3GL1Q99961 368 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 CORO1CQ9ULV4 474 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-204ENST00000375290 THRAP3Q9Y2W1 955 aaKnown RBP10.71□□□□□ -0.69
PTCH1-204ENST00000375290 PCDHB2Q9Y5E7 798 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 HMOX2P30519 316 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 ARSEP51690 589 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 HP1BP3Q5SSJ5 553 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-204ENST00000375290 SYDE2Q5VT97 1194 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 H0YIN7 160 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 GNA15P30679 374 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 NAB1Q13506 487 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 NCAPHQ15003 741 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 SBK1Q52WX2 424 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 GREM2Q9H772 168 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 CIDEBQ9UHD4 219 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 CDYLQ9Y232 598 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 KATNA1O75449 491 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 PDE5AO76074 875 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 BCAMP50895 628 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 MTA1Q13330 715 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 PREPLQ4J6C6 727 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-204ENST00000375290 TTLL11Q8NHH1 800 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 GIMAP4Q9NUV9 329 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 PRDM4Q9UKN5 801 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 P4HBP07237 508 aaKnown RBP10.71□□□□□ -0.69
PTCH1-204ENST00000375290 SGSM1Q2NKQ1 1148 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 LRRC6Q86X45 466 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 PLD3Q8IV08 490 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 SEPT9Q9UHD8 586 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-204ENST00000375290 DCTN4Q9UJW0 460 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 ALKQ9UM73 1620 aa10.71□□□□□ -0.69
PTCH1-204ENST00000375290 POLBP06746 335 aa10.71□□□□□ -0.7
PTCH1-204ENST00000375290 TUBA4AP68366 448 aa10.71□□□□□ -0.7
PTCH1-204ENST00000375290 BEST2Q8NFU1 509 aa10.71□□□□□ -0.7
PTCH1-204ENST00000375290 CCT7Q99832 543 aa10.71□□□□□ -0.7
PTCH1-204ENST00000375290 MAP3K20Q9NYL2 800 aaKnown RBP10.71□□□□□ -0.7
PTCH1-204ENST00000375290 CCNL1Q9UK58 526 aaPredicted RBP10.71□□□□□ -0.7
PTCH1-204ENST00000375290 PSMC3P17980 439 aa10.71□□□□□ -0.7
PTCH1-204ENST00000375290 BNC1Q01954 994 aa10.71□□□□□ -0.7
PTCH1-204ENST00000375290 RBBP8Q99708 897 aa10.71□□□□□ -0.7
PTCH1-204ENST00000375290 MED10Q9BTT4 135 aa10.71□□□□□ -0.7
PTCH1-204ENST00000375290 PJA2O43164 708 aa10.71□□□□□ -0.7
PTCH1-204ENST00000375290 RDM1Q8NG50 284 aa10.71□□□□□ -0.7
PTCH1-204ENST00000375290 ASAP3Q8TDY4 903 aa10.71□□□□□ -0.7
PTCH1-204ENST00000375290 EFCAB1Q9HAE3 211 aa10.71□□□□□ -0.7
PTCH1-204ENST00000375290 KLHL8Q9P2G9 620 aaPredicted RBP10.71□□□□□ -0.7
PTCH1-204ENST00000375290 APOL1O14791 398 aa10.71□□□□□ -0.7
PTCH1-204ENST00000375290 CDKAL1Q5VV42 579 aa10.71□□□□□ -0.7
PTCH1-204ENST00000375290 KIAA0825Q8IV33 1275 aa10.71□□□□□ -0.7
PTCH1-204ENST00000375290 DDX39AO00148 427 aaKnown RBP10.7□□□□□ -0.7
PTCH1-204ENST00000375290 DCTN2Q13561 401 aaKnown RBP10.7□□□□□ -0.7
PTCH1-204ENST00000375290 TXNRD1Q16881 649 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 SLC35G2Q8TBE7 412 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 FAM167BQ9BTA0 163 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 SLC8A2Q9UPR5 921 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 MAP2P11137 1827 aaKnown RBP10.7□□□□□ -0.7
PTCH1-204ENST00000375290 CLDN3O15551 220 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 NCLNQ969V3 563 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 PIGSQ96S52 555 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 SH3GL2Q99962 352 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 MROH2AA6NES4 1674 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 ESYT3A0FGR9 886 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 FDFT1P37268 417 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 YWHAHQ04917 246 aaPredicted RBP10.7□□□□□ -0.7
PTCH1-204ENST00000375290 TRIP10Q15642 601 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 THNSL1Q8IYQ7 743 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 GPD1LQ8N335 351 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 RIC8BQ9NVN3 520 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 LRRC43Q8N309 656 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 AENQ8WTP8 325 aaKnown RBP10.7□□□□□ -0.7
PTCH1-204ENST00000375290 CNKSR1Q969H4 720 aa10.7□□□□□ -0.7
PTCH1-204ENST00000375290 NDUFB9Q9Y6M9 179 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms