RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 NELFBQ8WX92 580 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 C17orf80Q9BSJ5 609 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 MKNK1Q9BUB5 465 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 ZNF576Q9H609 170 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 RBAKQ9NYW8 714 aaPredicted RBP12.34□□□□□ -0.43
HSPG2-202ENST00000374676 HCSTQ9UBK5 93 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 DACH1Q9UI36 760 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 UBQLN1Q9UMX0 589 aaKnown RBP12.34□□□□□ -0.43
HSPG2-202ENST00000374676 FRMD4BQ9Y2L6 1034 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 C2CD2Q9Y426 696 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 PCDHB12Q9Y5F1 795 aa12.34□□□□□ -0.43
HSPG2-202ENST00000374676 XPOTO43592 962 aaKnown RBP12.33□□□□□ -0.44
HSPG2-202ENST00000374676 B4GALT3O60512 393 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 ERCC5P28715 1186 aaPredicted RBP12.33□□□□□ -0.44
HSPG2-202ENST00000374676 ALDH7A1P49419 539 aaKnown RBP12.33□□□□□ -0.44
HSPG2-202ENST00000374676 CASP4P49662 377 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 PMS1P54277 932 aaKnown RBP12.33□□□□□ -0.44
HSPG2-202ENST00000374676 ENPEPQ07075 957 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 CYP24A1Q07973 514 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 PSMD6Q15008 389 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 DPCR1Q3MIW9 517 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 GLRA4Q5JXX5 417 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 KLHL10Q6JEL2 608 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 TTI2Q6NXR4 508 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 RDH13Q8NBN7 331 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 NOC3LQ8WTT2 800 aaKnown RBP12.33□□□□□ -0.44
HSPG2-202ENST00000374676 FAM212AQ96EL1 285 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 KIF12Q96FN5 646 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 DDX27Q96GQ7 796 aaKnown RBP12.33□□□□□ -0.44
HSPG2-202ENST00000374676 CEP63Q96MT8 703 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 UROC1Q96N76 676 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 ZNF558Q96NG5 402 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 DUSP9Q99956 384 aaKnown RBP12.33□□□□□ -0.44
HSPG2-202ENST00000374676 TTYH1Q9H313 450 aaPredicted RBP12.33□□□□□ -0.44
HSPG2-202ENST00000374676 ANO10Q9NW15 660 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 DNAJB4Q9UDY4 337 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 RWDD2AQ9UIY3 292 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 FAN1Q9Y2M0 1017 aa12.33□□□□□ -0.44
HSPG2-202ENST00000374676 TRIM49BA6NDI0 452 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 NRP1O14786 923 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 ZC3H11AO75152 810 aaKnown RBP eCLIP12.32□□□□□ -0.44
HSPG2-202ENST00000374676 AKAP3O75969 853 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 LRPAP1P30533 357 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 RPL9P32969 192 aaKnown RBP12.32□□□□□ -0.44
HSPG2-202ENST00000374676 CTNNB1P35222 781 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 PPM1AP35813 382 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 PSMC2P35998 433 aaKnown RBP12.32□□□□□ -0.44
HSPG2-202ENST00000374676 SLC11A1P49279 550 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 FXR1P51114 621 aaKnown RBP eCLIP12.32□□□□□ -0.44
HSPG2-202ENST00000374676 WNT7BP56706 349 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 PLCB3Q01970 1234 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 SOX4Q06945 474 aaPredicted RBP12.32□□□□□ -0.44
HSPG2-202ENST00000374676 TMEM132DQ14C87 1099 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 ZNF697Q5TEC3 545 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 SPATA1Q5VX52 437 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 JADE1Q6IE81 842 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 SPRED2Q7Z698 418 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 SLC39A11Q8N1S5 342 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 FBXO22Q8NEZ5 403 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 TMC2Q8TDI7 906 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 PARD3BQ8TEW8 1205 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 CACTINQ8WUQ7 758 aaKnown RBP12.32□□□□□ -0.44
HSPG2-202ENST00000374676 COLEC11Q9BWP8 271 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 PDE11AQ9HCR9 933 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 SPG21Q9NZD8 308 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 CTNND2Q9UQB3 1225 aa12.32□□□□□ -0.44
HSPG2-202ENST00000374676 H3BNC9 293 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 SLC16A3O15427 465 aaKnown RBP12.31□□□□□ -0.44
HSPG2-202ENST00000374676 NFICP08651 508 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 OR1G1P47890 313 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 STX17P56962 302 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 CLDN10P78369 228 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 SPAG1Q07617 926 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 STX1AQ16623 288 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 UPP1Q16831 310 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 CEP135Q66GS9 1140 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 DCLRE1AQ6PJP8 1040 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 INTS8Q75QN2 995 aaKnown RBP12.31□□□□□ -0.44
HSPG2-202ENST00000374676 FILIP1Q7Z7B0 1213 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 USP37Q86T82 979 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 WDR49Q8IV35 697 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 EFCAB13Q8IY85 973 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 FAM186BQ8IYM0 893 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 KLHL23Q8NBE8 558 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 BEST2Q8NFU1 509 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 SPPL3Q8TCT6 385 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 ARNTL2Q8WYA1 636 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 C18orf25Q96B23 403 aaPredicted RBP12.31□□□□□ -0.44
HSPG2-202ENST00000374676 BORCS6Q96GS4 357 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 IGSF21Q96ID5 467 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 MED15Q96RN5 788 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 C11orf84Q9BUA3 381 aaPredicted RBP12.31□□□□□ -0.44
HSPG2-202ENST00000374676 GZF1Q9H116 711 aaPredicted RBP12.31□□□□□ -0.44
HSPG2-202ENST00000374676 INTS13Q9NVM9 706 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 LZTS1Q9Y250 596 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 SCN1AP35498 2009 aa12.31□□□□□ -0.44
HSPG2-202ENST00000374676 PRRC2BQ5JSZ5 2229 aaKnown RBP12.3□□□□□ -0.44
HSPG2-202ENST00000374676 PLXNA4Q9HCM2 1894 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 CASTOR2A6NHX0 329 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 NT5C1B-RDH14C9J2C7 533 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms