RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 SIX6OS1Q8N1H7 587 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 DEPDC1BQ8WUY9 529 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 OTUB1Q96FW1 271 aaPredicted RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 RBM41Q96IZ5 413 aaKnown RBP6.66□□□□□ -1.34
PTPN3-202ENST00000374541 KLC2Q9H0B6 622 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 IRF2BPLQ9H1B7 796 aa6.66□□□□□ -1.34
PTPN3-202ENST00000374541 NRKQ7Z2Y5 1582 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 PNMA6FA0A0J9YX94 578 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 C16orf96A6NNT2 1141 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 COPEO14579 308 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 KRT16P08779 473 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 GHRP10912 638 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 KCNA5P22460 613 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 TM4SF1P30408 202 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 GPM6BQ13491 265 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 TBCCQ15814 346 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 ARL13BQ3SXY8 428 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 DARS2Q6PI48 645 aaKnown RBP6.65□□□□□ -1.34
PTPN3-202ENST00000374541 PI16Q6UXB8 463 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 ARMC2Q8NEN0 867 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 UHMK1Q8TAS1 419 aaKnown RBP6.65□□□□□ -1.34
PTPN3-202ENST00000374541 FAM149B1Q96BN6 582 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 SRPK1Q96SB4 655 aaKnown RBP6.65□□□□□ -1.34
PTPN3-202ENST00000374541 TINF2Q9BSI4 451 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 RNF26Q9BY78 433 aaPredicted RBP6.65□□□□□ -1.34
PTPN3-202ENST00000374541 PALMDQ9NP74 551 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 TOPAZ1Q8N9V7 1692 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 RGPD8O14715 1765 aaPredicted RBP6.65□□□□□ -1.34
PTPN3-202ENST00000374541 MYO1CO00159 1063 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 NCF2P19878 526 aaPredicted RBP6.65□□□□□ -1.34
PTPN3-202ENST00000374541 EPHB3P54753 998 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 ME3Q16798 604 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 MYLK4Q86YV6 388 aaPredicted RBP6.65□□□□□ -1.34
PTPN3-202ENST00000374541 VSTM4Q8IW00 320 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 OR6B3Q8NGW1 331 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 FAM227BQ96M60 508 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 UNC93B1Q9H1C4 597 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 SLC38A10Q9HBR0 1119 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 MRPL17Q9NRX2 175 aaKnown RBP6.65□□□□□ -1.34
PTPN3-202ENST00000374541 MPP6Q9NZW5 540 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 PCDHB4Q9Y5E5 795 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 QRICH2Q9H0J4 1663 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 MEI4A8MW99 385 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 H0Y626 953 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 GOLGA8TH3BQL2 631 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 MEIS1O00470 390 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 CCDC22O60826 627 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 TRIM16O95361 564 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 POTEIP0CG38 1075 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 CYP2D6P10635 497 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 CDH2P19022 906 aaPredicted RBP6.65□□□□□ -1.34
PTPN3-202ENST00000374541 SF3A3Q12874 501 aaKnown RBP eCLIP6.65□□□□□ -1.34
PTPN3-202ENST00000374541 SEMA3FQ13275 785 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 TFDP2Q14188 446 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 ZNF568Q3ZCX4 644 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 TEX2Q8IWB9 1127 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 NCLNQ969V3 563 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.65□□□□□ -1.34
PTPN3-202ENST00000374541 PARD6BQ9BYG5 372 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 ABCG4Q9H172 646 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 C2orf40Q9H1Z8 148 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 JPH1Q9HDC5 661 aaPredicted RBP6.65□□□□□ -1.34
PTPN3-202ENST00000374541 TBC1D22BQ9NU19 505 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 KNDC1Q76NI1 1749 aa6.65□□□□□ -1.34
PTPN3-202ENST00000374541 GRID2IPA4D2P6 1211 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 JAK2O60674 1132 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 GRIK1P39086 918 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 MORF4L2Q15014 288 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 TIGD5Q53EQ6 642 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 TEX9Q8N6V9 391 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 DDX50Q9BQ39 737 aaKnown RBP6.65□□□□□ -1.35
PTPN3-202ENST00000374541 STN1Q9H668 368 aaKnown RBP6.65□□□□□ -1.35
PTPN3-202ENST00000374541 GABBR1Q9UBS5 961 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 ZFP69BQ9UJL9 534 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 NDRG2Q9UN36 371 aaKnown RBP6.65□□□□□ -1.35
PTPN3-202ENST00000374541 PRPSAP2O60256 369 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 IRF1P10914 325 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 RALAP11233 206 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 PLS3P13797 630 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 VCAM1P19320 739 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 NR2F2P24468 414 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 YWHAHQ04917 246 aaPredicted RBP6.65□□□□□ -1.35
PTPN3-202ENST00000374541 SLC45A4Q5BKX6 768 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 KAZNQ674X7 775 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 TBC1D1Q86TI0 1168 aaPredicted RBP6.65□□□□□ -1.35
PTPN3-202ENST00000374541 PYROXD1Q8WU10 500 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 MAML1Q92585 1016 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 BRD9Q9H8M2 597 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 SCUBE2Q9NQ36 999 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 BLOC1S6Q9UL45 172 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 CFLARO15519 480 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 KDM1AO60341 852 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 HOXC6P09630 235 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 AKR1B1P15121 316 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 CLCN6P51797 869 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 EPHB1P54762 984 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 DEFA1P59665 94 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 DEFA3P59666 94 aa6.65□□□□□ -1.35
PTPN3-202ENST00000374541 BASP1P80723 227 aaKnown RBP6.65□□□□□ -1.35
PTPN3-202ENST00000374541 LRRC63Q05C16 580 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms