RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 PPP1R2P3Q6NXS1 205 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 NSMFQ6X4W1 530 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 CYFIP1Q7L576 1253 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 VSIG10LQ86VR7 867 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 ZNF677Q86XU0 584 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 GPD1LQ8N335 351 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 SEMA4DQ92854 862 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 KCNN1Q92952 543 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 KAT5Q92993 513 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 PABPC3Q9H361 631 aaKnown RBP14.94□□□□□ -0.02
HMGCL-203ENST00000374490 ERVK-5Q9HDB9 667 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 SLC12A6Q9UHW9 1150 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 AFG3L2Q9Y4W6 797 aa14.94□□□□□ -0.02
HMGCL-203ENST00000374490 VWA5AO00534 786 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 ATP9AO75110 1047 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 ADSSP30520 456 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 HPDP32754 393 aaPredicted RBP14.93□□□□□ -0.02
HMGCL-203ENST00000374490 MAN1A1P33908 653 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 FLT3P36888 993 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 CLEC16AQ2KHT3 1053 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 ODF2Q5BJF6 829 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 DENND2CQ68D51 928 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 SYDE1Q6ZW31 735 aaPredicted RBP14.93□□□□□ -0.02
HMGCL-203ENST00000374490 ANO5Q75V66 913 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 SLC13A5Q86YT5 568 aaPredicted RBP14.93□□□□□ -0.02
HMGCL-203ENST00000374490 PRELID2Q8N945 189 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 OR2W6PQ8NHA6 318 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 MYCBPAPQ8TBZ2 947 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 POMGNT1Q8WZA1 660 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 KRT35Q92764 455 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 TLCD1Q96CP7 247 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 ATG4CQ96DT6 458 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 CEP170P1Q96L14 293 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 IFT74Q96LB3 600 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 TMEM109Q9BVC6 243 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 STMN4Q9H169 189 aaPredicted RBP14.93□□□□□ -0.02
HMGCL-203ENST00000374490 AVENQ9NQS1 362 aaPredicted RBP14.93□□□□□ -0.02
HMGCL-203ENST00000374490 ATP8A1Q9Y2Q0 1164 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 NR2E1Q9Y466 385 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 COL11A1P12107 1806 aaPredicted RBP14.93□□□□□ -0.02
HMGCL-203ENST00000374490 PTPRFP10586 1907 aa14.93□□□□□ -0.02
HMGCL-203ENST00000374490 GPR25O00155 361 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 NR3C2P08235 984 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 MMEP08473 750 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 COILP38432 576 aaPredicted RBP14.92□□□□□ -0.02
HMGCL-203ENST00000374490 BYSLQ13895 437 aaKnown RBP14.92□□□□□ -0.02
HMGCL-203ENST00000374490 SH3D19Q5HYK7 790 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 SLC47A2Q86VL8 602 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 NSUN6Q8TEA1 469 aaKnown RBP14.92□□□□□ -0.02
HMGCL-203ENST00000374490 CCDC127Q96BQ5 260 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 CENPTQ96BT3 561 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 SAAL1Q96ER3 474 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 PGM2Q96G03 612 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 CCT8L2Q96SF2 557 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 TRIM31Q9BZY9 425 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 ATP6V0A4Q9HBG4 840 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 C1orf112Q9NSG2 853 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 BCCIPQ9P287 314 aaKnown RBP eCLIP14.92□□□□□ -0.02
HMGCL-203ENST00000374490 GABBR1Q9UBS5 961 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 NOVA2Q9UNW9 492 aaKnown RBP14.92□□□□□ -0.02
HMGCL-203ENST00000374490 GMNCA6NCL1 334 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 DSG3P32926 999 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 SLC1A1P43005 524 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 ADCY2Q08462 1091 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 BAATQ14032 418 aaPredicted RBP14.92□□□□□ -0.02
HMGCL-203ENST00000374490 CCDC137Q6PK04 289 aaKnown RBP14.92□□□□□ -0.02
HMGCL-203ENST00000374490 ZDHHC24Q6UX98 284 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 ADAT2Q7Z6V5 191 aaKnown RBP14.92□□□□□ -0.02
HMGCL-203ENST00000374490 ANKRD13AQ8IZ07 590 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 PROCA1Q8NCQ7 364 aaPredicted RBP14.92□□□□□ -0.02
HMGCL-203ENST00000374490 ZSWIM2Q8NEG5 633 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 SLCO2A1Q92959 643 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 SNX24Q9Y343 169 aa14.92□□□□□ -0.02
HMGCL-203ENST00000374490 MYPNQ86TC9 1320 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 RLFQ13129 1914 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 TMEM150BA6NC51 233 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 E7EVH7 732 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 MEFVO15553 781 aaPredicted RBP14.91□□□□□ -0.02
HMGCL-203ENST00000374490 TRAPPC3O43617 180 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 STBD1O95210 358 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 ALDH1A1P00352 501 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 PLTPP55058 493 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 DRP2Q13474 957 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 GNPTABQ3T906 1256 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 LDLRAD1Q5T700 205 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 MIS18BP1Q6P0N0 1132 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 TRIM72Q6ZMU5 477 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 CATSPERGQ6ZRH7 1159 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 SV2AQ7L0J3 742 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 CCDC105Q8IYK2 499 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 OTUD6BQ8N6M0 293 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 TAS1R2Q8TE23 839 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 BSNDQ8WZ55 320 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 DDX1Q92499 740 aaKnown RBP14.91□□□□□ -0.02
HMGCL-203ENST00000374490 C18orf8Q96DM3 657 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 BICD1Q96G01 975 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 LRRC19Q9H756 370 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 ELP3Q9H9T3 547 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 PDLIM7Q9NR12 457 aa14.91□□□□□ -0.02
HMGCL-203ENST00000374490 GRHL1Q9NZI5 618 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms