RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 PLXNA4Q9HCM2 1894 aa12.1□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ARHGEF37A1IGU5 675 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ITGA4P13612 1032 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 COPB1P53618 953 aaKnown RBP12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 JAM2P57087 298 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 SMYD4Q8IYR2 804 aaPredicted RBP12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 LMAN2LQ9H0V9 348 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 RBAKQ9NYW8 714 aaPredicted RBP12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 FSCN2O14926 492 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 TBC1D4O60343 1298 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 RB1P06400 928 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 FMO5P49326 533 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 PDE12Q6L8Q7 609 aaKnown RBP12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 PDXDC1Q6P996 788 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 DBF4BQ8NFT6 615 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 HERC2P3Q9BVR0 1158 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 MTIF3Q9H2K0 278 aaKnown RBP12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 RSAD1Q9HA92 442 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 PIN4Q9Y237 131 aaKnown RBP12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 TRIM49BA6NDI0 452 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 GHRP10912 638 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ZNF132P52740 706 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 KRT39Q6A163 491 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 TOP6BLQ8N6T0 577 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ADAM2Q99965 735 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 FANCLQ9NW38 375 aa12.09□□□□□ -0.47
CSGALNACT2-201ENST00000374466 ASS1P00966 412 aaKnown RBP12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 FGBP02675 491 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 CYP2C18P33260 490 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 TUSC3Q13454 348 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 EFCAB13Q8IY85 973 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 LRRC43Q8N309 656 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 EHBP1Q8NDI1 1231 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 ZBTB45Q96K62 511 aaPredicted RBP12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 NUCKS1Q9H1E3 243 aaKnown RBP12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 GANQ9H2C0 597 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 TRIP11Q15643 1979 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 KIF26AQ9ULI4 1882 aaPredicted RBP12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 SMIM28A0A1B0GU29 152 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 LACTBL1A8MY62 500 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 GFPT2O94808 682 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 VNN1O95497 513 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 YARSP54577 528 aaKnown RBP12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 UPP1Q16831 310 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 DUOXA2Q1HG44 320 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 AOPEPQ8N6M6 819 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 TUBGCP2Q9BSJ2 902 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 NDST4Q9H3R1 872 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 VWA8A3KMH1 1905 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 RECQL4O94761 1208 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 RAG1P15918 1043 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 RPL34P49207 117 aaKnown RBP12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 MRE11P49959 708 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 RAD51AP2Q09MP3 1159 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 COL19A1Q14993 1142 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 DCLRE1AQ6PJP8 1040 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 CBWD2Q8IUF1 395 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 CPB2Q96IY4 423 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 SIX4Q9UIU6 781 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 IRAK3Q9Y616 596 aa12.08□□□□□ -0.48
CSGALNACT2-201ENST00000374466 ARL5CA6NH57 179 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 GABRDO14764 452 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 EVI5O60447 810 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 KRT13P13646 458 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 WARSP23381 471 aaKnown RBP12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 CASP4P49662 377 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 LRIT3Q3SXY7 679 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 ANKRD20A12PQ8NF67 263 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 LMCD1Q9NZU5 365 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 NENFQ9UMX5 172 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 SYN3O14994 580 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 EXOC3O60645 756 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 NOMO2Q5JPE7 1267 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 TMEM86AQ8N2M4 240 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 BEST2Q8NFU1 509 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 HDAC7Q8WUI4 952 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 DENND4AQ7Z401 1863 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 GJB5O95377 273 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 WNT7BP56706 349 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 GSCP56915 257 aaPredicted RBP12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 CREMQ03060 361 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 KCNMA1Q12791 1236 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 TCEAL1Q15170 157 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 SGSM1Q2NKQ1 1148 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 SCML4Q8N228 414 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 ERCC4Q92889 916 aaPredicted RBP12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 PKMYT1Q99640 499 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 SYT11Q9BT88 431 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 UBXN6Q9BZV1 441 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 SAMSN1Q9NSI8 373 aaKnown RBP12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 DSEQ9UL01 958 aa12.07□□□□□ -0.48
CSGALNACT2-201ENST00000374466 BIN1O00499 593 aa12.06□□□□□ -0.48
CSGALNACT2-201ENST00000374466 TBXAS1P24557 533 aaPredicted RBP12.06□□□□□ -0.48
CSGALNACT2-201ENST00000374466 SMARCB1Q12824 385 aa12.06□□□□□ -0.48
CSGALNACT2-201ENST00000374466 TMEM132DQ14C87 1099 aa12.06□□□□□ -0.48
CSGALNACT2-201ENST00000374466 MAEAQ7L5Y9 396 aa12.06□□□□□ -0.48
CSGALNACT2-201ENST00000374466 VSTM4Q8IW00 320 aa12.06□□□□□ -0.48
CSGALNACT2-201ENST00000374466 URGCPQ8TCY9 931 aa12.06□□□□□ -0.48
CSGALNACT2-201ENST00000374466 UBE2Q2Q8WVN8 375 aa12.06□□□□□ -0.48
CSGALNACT2-201ENST00000374466 BADQ92934 168 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms