RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 YDJCA8MPS7 323 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 HNRNPDLO14979 420 aaKnown RBP12.17□□□□□ -0.46
PTPN20-204ENST00000374346 CETN2P41208 172 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 GSCP56915 257 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-204ENST00000374346 MRPS9P82933 396 aaKnown RBP12.17□□□□□ -0.46
PTPN20-204ENST00000374346 CYP24A1Q07973 514 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 MKRN3Q13064 507 aaKnown RBP12.17□□□□□ -0.46
PTPN20-204ENST00000374346 NEDD9Q14511 834 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 SPRED3Q2MJR0 410 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 PPP1R2P3Q6NXS1 205 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 ZNF365Q70YC5 407 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 SV2AQ7L0J3 742 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.17□□□□□ -0.46
PTPN20-204ENST00000374346 FAM83AQ86UY5 434 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 CPXCR1Q8N123 301 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 CCDC89Q8N998 374 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 CCDC63Q8NA47 563 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 GIMAP7Q8NHV1 300 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-204ENST00000374346 CLEC4DQ8WXI8 215 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 SH2D3AQ9BRG2 576 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 NTPCRQ9BSD7 190 aaKnown RBP12.17□□□□□ -0.46
PTPN20-204ENST00000374346 ANAPC5Q9UJX4 755 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 USP15Q9Y4E8 981 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-204ENST00000374346 TMEM120BA0PK00 339 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 PLSCR1O15162 318 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 MGRN1O60291 552 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 MYCLP12524 364 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-204ENST00000374346 EIF2AK2P19525 551 aaKnown RBP12.17□□□□□ -0.46
PTPN20-204ENST00000374346 GARTP22102 1010 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 PGM5Q15124 567 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 CCDC38Q502W7 563 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 BRDTQ58F21 947 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-204ENST00000374346 LIN9Q5TKA1 542 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 HIBCHQ6NVY1 386 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-204ENST00000374346 ARHGEF18Q6ZSZ5 1173 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 CEP57Q86XR8 500 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 MCOLN2Q8IZK6 566 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 PLCD3Q8N3E9 789 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 SYTL5Q8TDW5 730 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-204ENST00000374346 BICD1Q96G01 975 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 POP1Q99575 1024 aaKnown RBP12.17□□□□□ -0.46
PTPN20-204ENST00000374346 ZNF341Q9BYN7 854 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 KIAA1586Q9HCI6 787 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 MRPL47Q9HD33 250 aaKnown RBP12.17□□□□□ -0.46
PTPN20-204ENST00000374346 KCNK9Q9NPC2 374 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 RGPD3A6NKT7 1758 aaPredicted RBP12.17□□□□□ -0.46
PTPN20-204ENST00000374346 RGPD4Q7Z3J3 1758 aa12.17□□□□□ -0.46
PTPN20-204ENST00000374346 SNX3O60493 162 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 TCEA3O75764 348 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 UNGP13051 313 aaPredicted RBP12.16□□□□□ -0.46
PTPN20-204ENST00000374346 ITGA8P53708 1063 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 LMNB2Q03252 620 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 PTP4A2Q12974 167 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 UGCGQ16739 394 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 ZNF568Q3ZCX4 644 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 PREPLQ4J6C6 727 aaPredicted RBP12.16□□□□□ -0.46
PTPN20-204ENST00000374346 PLA2G4FQ68DD2 849 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 DHX38Q92620 1227 aaKnown RBP12.16□□□□□ -0.46
PTPN20-204ENST00000374346 ATP6V0A1Q93050 837 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 DDX23Q9BUQ8 820 aaKnown RBP12.16□□□□□ -0.46
PTPN20-204ENST00000374346 HOMER2Q9NSB8 354 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 PCDHA10Q9Y5I2 948 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 CNTNAP1P78357 1384 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 BRWD3Q6RI45 1802 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 TESPA1A2RU30 521 aaPredicted RBP12.16□□□□□ -0.46
PTPN20-204ENST00000374346 TMEM150BA6NC51 233 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 PSTPIP1O43586 416 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 GRIN3BO60391 1043 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 CDH16O75309 829 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 NF2P35240 595 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 TBC1D10BQ4KMP7 808 aaPredicted RBP12.16□□□□□ -0.46
PTPN20-204ENST00000374346 ARHGEF16Q5VV41 709 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 XRRA1Q6P2D8 792 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 RHBDF2Q6PJF5 856 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 TRIM72Q6ZMU5 477 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 NLRX1Q86UT6 975 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 RHOT1Q8IXI2 618 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 MCPH1Q8NEM0 835 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 CCHCR1Q8TD31 782 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 CEP170P1Q96L14 293 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 IFT74Q96LB3 600 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 FNBP1Q96RU3 617 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 RMDN3Q96TC7 470 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 MOV10L1Q9BXT6 1211 aaKnown RBP12.16□□□□□ -0.46
PTPN20-204ENST00000374346 FOXP3Q9BZS1 431 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 DCLK3Q9C098 648 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 TMEM39BQ9GZU3 492 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 NKIRAS1Q9NYS0 192 aa12.16□□□□□ -0.46
PTPN20-204ENST00000374346 O00370 1275 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 MAFGO15525 162 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 SORBS3O60504 671 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 CHRNA5P30532 468 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 RPS6P62753 249 aaKnown RBP12.15□□□□□ -0.46
PTPN20-204ENST00000374346 SPP2Q13103 211 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 WLSQ5T9L3 541 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 NUGGCQ68CJ6 796 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 MGARPQ8TDB4 240 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 C7orf43Q8WVR3 580 aa12.15□□□□□ -0.46
PTPN20-204ENST00000374346 GLIS2Q9BZE0 524 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms