RNA–Protein interactions for RNA: ENST00000373573.7

HDAC8-207, Transcript of histone deacetylase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC8, Length 2,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-207ENST00000373573 NSMCE1Q8WV22 266 aa14.03□□□□□ -0.16
HDAC8-207ENST00000373573 IFT74Q96LB3 600 aa14.03□□□□□ -0.16
HDAC8-207ENST00000373573 ARHGEF3Q9NR81 526 aa14.03□□□□□ -0.16
HDAC8-207ENST00000373573 CHST7Q9NS84 486 aa14.03□□□□□ -0.16
HDAC8-207ENST00000373573 CTNNAL1Q9UBT7 734 aa14.03□□□□□ -0.16
HDAC8-207ENST00000373573 ATRNL1Q5VV63 1379 aa14.02□□□□□ -0.16
HDAC8-207ENST00000373573 SORBS3O60504 671 aa14.02□□□□□ -0.16
HDAC8-207ENST00000373573 ADRB2P07550 413 aa14.02□□□□□ -0.16
HDAC8-207ENST00000373573 RPSAP08865 295 aaKnown RBP14.02□□□□□ -0.16
HDAC8-207ENST00000373573 BRAFP15056 766 aa14.02□□□□□ -0.16
HDAC8-207ENST00000373573 CCND1P24385 295 aa14.02□□□□□ -0.16
HDAC8-207ENST00000373573 GTF2BQ00403 316 aa14.02□□□□□ -0.16
HDAC8-207ENST00000373573 KYNUQ16719 465 aa14.02□□□□□ -0.16
HDAC8-207ENST00000373573 CCDC174Q6PII3 467 aa14.02□□□□□ -0.16
HDAC8-207ENST00000373573 ASRGL1Q7L266 308 aa14.02□□□□□ -0.16
HDAC8-207ENST00000373573 SEMA4DQ92854 862 aa14.02□□□□□ -0.16
HDAC8-207ENST00000373573 KLHL29Q96CT2 875 aa14.02□□□□□ -0.16
HDAC8-207ENST00000373573 TGS1Q96RS0 853 aaKnown RBP14.02□□□□□ -0.16
HDAC8-207ENST00000373573 ST6GALNAC4Q9H4F1 302 aa14.02□□□□□ -0.16
HDAC8-207ENST00000373573 ZNF277Q9NRM2 450 aaPredicted RBP14.02□□□□□ -0.16
HDAC8-207ENST00000373573 NINJ2Q9NZG7 142 aa14.02□□□□□ -0.16
HDAC8-207ENST00000373573 NOP53Q9NZM5 478 aaKnown RBP14.02□□□□□ -0.16
HDAC8-207ENST00000373573 MRPL11Q9Y3B7 192 aaKnown RBP14.02□□□□□ -0.16
HDAC8-207ENST00000373573 L3MBTL1Q9Y468 752 aa14.02□□□□□ -0.16
HDAC8-207ENST00000373573 ZNF536O15090 1300 aa14.02□□□□□ -0.17
HDAC8-207ENST00000373573 ADGRA3Q8IWK6 1321 aa14.02□□□□□ -0.17
HDAC8-207ENST00000373573 THAP12O43422 761 aa14.02□□□□□ -0.17
HDAC8-207ENST00000373573 GAS8O95995 478 aa14.02□□□□□ -0.17
HDAC8-207ENST00000373573 GH1P01241 217 aa14.02□□□□□ -0.17
HDAC8-207ENST00000373573 KRT16P08779 473 aa14.02□□□□□ -0.17
HDAC8-207ENST00000373573 ATF2P15336 505 aa14.02□□□□□ -0.17
HDAC8-207ENST00000373573 MKRN4PQ13434 485 aaPredicted RBP14.02□□□□□ -0.17
HDAC8-207ENST00000373573 RNF43Q68DV7 783 aa14.02□□□□□ -0.17
HDAC8-207ENST00000373573 MIER3Q7Z3K6 550 aa14.02□□□□□ -0.17
HDAC8-207ENST00000373573 FITM2Q8N6M3 262 aa14.02□□□□□ -0.17
HDAC8-207ENST00000373573 GDAP1Q8TB36 358 aa14.02□□□□□ -0.17
HDAC8-207ENST00000373573 HELQQ8TDG4 1101 aa14.02□□□□□ -0.17
HDAC8-207ENST00000373573 DDX1Q92499 740 aaKnown RBP14.02□□□□□ -0.17
HDAC8-207ENST00000373573 MAGEB18Q96M61 343 aa14.02□□□□□ -0.17
HDAC8-207ENST00000373573 MXRA8Q9BRK3 442 aa14.02□□□□□ -0.17
HDAC8-207ENST00000373573 TRAIPQ9BWF2 469 aa14.02□□□□□ -0.17
HDAC8-207ENST00000373573 DCLK3Q9C098 648 aa14.02□□□□□ -0.17
HDAC8-207ENST00000373573 RANBP17Q9H2T7 1088 aaKnown RBP14.02□□□□□ -0.17
HDAC8-207ENST00000373573 MLXIPLQ9NP71 852 aa14.02□□□□□ -0.17
HDAC8-207ENST00000373573 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.02□□□□□ -0.172e-6■■■■■ 226.9
HDAC8-207ENST00000373573 COQ4Q9Y3A0 265 aa14.02□□□□□ -0.17
HDAC8-207ENST00000373573 GRIN3BO60391 1043 aa14.01□□□□□ -0.17
HDAC8-207ENST00000373573 P4HBP07237 508 aaKnown RBP14.01□□□□□ -0.17
HDAC8-207ENST00000373573 STX2P32856 288 aa14.01□□□□□ -0.17
HDAC8-207ENST00000373573 SKIV2L2P42285 1042 aaKnown RBP14.01□□□□□ -0.17
HDAC8-207ENST00000373573 LLGL1Q15334 1064 aa14.01□□□□□ -0.17
HDAC8-207ENST00000373573 CLEC16AQ2KHT3 1053 aa14.01□□□□□ -0.17
HDAC8-207ENST00000373573 CGB2Q6NT52 195 aa14.01□□□□□ -0.17
HDAC8-207ENST00000373573 ARHGEF18Q6ZSZ5 1173 aa14.01□□□□□ -0.17
HDAC8-207ENST00000373573 HAUS6Q7Z4H7 955 aa14.01□□□□□ -0.17
HDAC8-207ENST00000373573 CYP4X1Q8N118 509 aa14.01□□□□□ -0.17
HDAC8-207ENST00000373573 ATG4AQ8WYN0 398 aa14.01□□□□□ -0.17
HDAC8-207ENST00000373573 KIFAP3Q92845 792 aa14.01□□□□□ -0.17
HDAC8-207ENST00000373573 VPS33BQ9H267 617 aa14.01□□□□□ -0.17
HDAC8-207ENST00000373573 ANAPC5Q9UJX4 755 aa14.01□□□□□ -0.17
HDAC8-207ENST00000373573 PNMA3Q9UL41 463 aa14.01□□□□□ -0.17
HDAC8-207ENST00000373573 ACTL7BQ9Y614 415 aa14.01□□□□□ -0.17
HDAC8-207ENST00000373573 COL2A1P02458 1487 aaPredicted RBP14□□□□□ -0.17
HDAC8-207ENST00000373573 YDJCA8MPS7 323 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 FOXO6A8MYZ6 492 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 DDX39AO00148 427 aaKnown RBP14□□□□□ -0.17
HDAC8-207ENST00000373573 POTEJP0CG39 1038 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 CCNB1P14635 433 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 MAPK4P31152 587 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 ECE1P42892 770 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 RARRES1P49788 294 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 GPC3P51654 580 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 CENPCQ03188 943 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 CCDC15Q0P6D6 951 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 ACVR2BQ13705 512 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 MTFR1Q15390 333 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 KRT39Q6A163 491 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 LARGE2Q8N3Y3 721 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 ATL2Q8NHH9 583 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 GRAMD1AQ96CP6 724 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 RMDN2Q96LZ7 410 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 IWS1Q96ST2 819 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 HERPUD2Q9BSE4 406 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 DNAJC17Q9NVM6 304 aaKnown RBP14□□□□□ -0.17
HDAC8-207ENST00000373573 NKIRAS1Q9NYS0 192 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 ANAPC7Q9UJX3 599 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 ZHX2Q9Y6X8 837 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 GOLGA8IPA6NC78 632 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 GOLGA8JA6NMD2 632 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 NFKBIEO00221 500 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 CDH16O75309 829 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 CETPP11597 493 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 MSH2P43246 934 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 STRN3Q13033 797 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 NAA25Q14CX7 972 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 TRIP13Q15645 432 aaPredicted RBP14□□□□□ -0.17
HDAC8-207ENST00000373573 ZKSCAN8Q15776 578 aaPredicted RBP14□□□□□ -0.17
HDAC8-207ENST00000373573 SNRNP35Q16560 246 aaKnown RBP14□□□□□ -0.17
HDAC8-207ENST00000373573 PPP1R21Q6ZMI0 780 aa14□□□□□ -0.17
HDAC8-207ENST00000373573 CBWD2Q8IUF1 395 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms