RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 CCNI2Q6ZMN8 369 aaPredicted RBP21.04■□□□□ 0.96
HDAC1-201ENST00000373548 TSHZ1Q6ZSZ6 1077 aa21.04■□□□□ 0.96
HDAC1-201ENST00000373548 PLEKHH3Q7Z736 793 aa21.04■□□□□ 0.96
HDAC1-201ENST00000373548 SELENOOQ9BVL4 669 aa21.04■□□□□ 0.96
HDAC1-201ENST00000373548 INO80BQ9C086 356 aaPredicted RBP21.04■□□□□ 0.96
HDAC1-201ENST00000373548 MINDY3Q9H8M7 445 aa21.04■□□□□ 0.96
HDAC1-201ENST00000373548 PTPRHQ9HD43 1115 aa21.04■□□□□ 0.96
HDAC1-201ENST00000373548 TMEM59LQ9UK28 342 aa21.04■□□□□ 0.96
HDAC1-201ENST00000373548 CPSF3Q9UKF6 684 aaKnown RBP21.04■□□□□ 0.96
HDAC1-201ENST00000373548 ANK1P16157 1881 aa21.03■□□□□ 0.96
HDAC1-201ENST00000373548 ASAP2O43150 1006 aa21.03■□□□□ 0.96
HDAC1-201ENST00000373548 MYBL2P10244 700 aa21.03■□□□□ 0.96
HDAC1-201ENST00000373548 ACO1P21399 889 aaKnown RBP21.03■□□□□ 0.96
HDAC1-201ENST00000373548 MBTD1Q05BQ5 628 aa21.03■□□□□ 0.96
HDAC1-201ENST00000373548 GRM1Q13255 1194 aa21.03■□□□□ 0.96
HDAC1-201ENST00000373548 CUL2Q13617 745 aa21.03■□□□□ 0.96
HDAC1-201ENST00000373548 C8orf74Q6P047 294 aa21.03■□□□□ 0.96
HDAC1-201ENST00000373548 MPZL3Q6UWV2 235 aa21.03■□□□□ 0.96
HDAC1-201ENST00000373548 WDR49Q8IV35 697 aa21.03■□□□□ 0.96
HDAC1-201ENST00000373548 RUBCNQ92622 972 aa21.03■□□□□ 0.96
HDAC1-201ENST00000373548 HINFPQ9BQA5 517 aa21.03■□□□□ 0.96
HDAC1-201ENST00000373548 C16orf70Q9BSU1 422 aa21.03■□□□□ 0.96
HDAC1-201ENST00000373548 MGAMO43451 1857 aa21.03■□□□□ 0.96
HDAC1-201ENST00000373548 ATF7IP2Q5U623 682 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 LINC01465Q8N7H1 131 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 UBXN6Q9BZV1 441 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 CHORDC1Q9UHD1 332 aaPredicted RBP21.02■□□□□ 0.96
HDAC1-201ENST00000373548 NUB1Q9Y5A7 615 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 UMODL1Q5DID0 1318 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 DDX3YO15523 660 aaKnown RBP21.02■□□□□ 0.96
HDAC1-201ENST00000373548 ATMINO43313 823 aaPredicted RBP21.02■□□□□ 0.96
HDAC1-201ENST00000373548 PHACTR2O75167 634 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 MTA2O94776 668 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 CLTAP09496 248 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 SMPD1P17405 629 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 AP3M2P53677 418 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 NOP14P78316 857 aaKnown RBP21.02■□□□□ 0.96
HDAC1-201ENST00000373548 NCOA4Q13772 614 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 GLE1Q53GS7 698 aaKnown RBP21.02■□□□□ 0.96
HDAC1-201ENST00000373548 CST9Q5W186 159 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 EEF1DP3Q658K8 133 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 C11orf63Q6NUN7 778 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 GSPT2Q8IYD1 628 aaKnown RBP21.02■□□□□ 0.96
HDAC1-201ENST00000373548 RASGEF1CQ8N431 466 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 NPLOC4Q8TAT6 608 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 CALR3Q96L12 384 aaKnown RBP21.02■□□□□ 0.96
HDAC1-201ENST00000373548 ST7Q9NRC1 585 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 STIM2Q9P246 746 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 PCDHB2Q9Y5E7 798 aa21.02■□□□□ 0.96
HDAC1-201ENST00000373548 ZNF236Q9UL36 1845 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 IQCF3P0C7M6 154 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 MAPK4P31152 587 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 CASP8Q14790 479 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 CLEC16AQ2KHT3 1053 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 ZNF568Q3ZCX4 644 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 MAP9Q49MG5 647 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 ACAD10Q6JQN1 1059 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 TINF2Q9BSI4 451 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 NFKBIZQ9BYH8 718 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 IFT122Q9HBG6 1241 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 NOC2LQ9Y3T9 749 aaKnown RBP21.01■□□□□ 0.95
HDAC1-201ENST00000373548 PGRMC1O00264 195 aaKnown RBP21.01■□□□□ 0.95
HDAC1-201ENST00000373548 MAGEB2O15479 319 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 PPFIA4O75335 1185 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 CYP1A2P05177 515 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 DUSP28Q4G0W2 176 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 CDR2LQ86X02 465 aaPredicted RBP21.01■□□□□ 0.95
HDAC1-201ENST00000373548 ZNF653Q96CK0 615 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 FAM212AQ96EL1 285 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 KRT12Q99456 494 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.01■□□□□ 0.954e-10■■□□□ 13.4
HDAC1-201ENST00000373548 MTMR12Q9C0I1 747 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 GTF3C4Q9UKN8 822 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 ALG6Q9Y672 507 aa21.01■□□□□ 0.95
HDAC1-201ENST00000373548 DOCK3Q8IZD9 2030 aa21■□□□□ 0.95
HDAC1-201ENST00000373548 COL1A2P08123 1366 aa21■□□□□ 0.95
HDAC1-201ENST00000373548 CST3P01034 146 aaPredicted RBP21■□□□□ 0.95
HDAC1-201ENST00000373548 BPIFB4P59827 614 aa21■□□□□ 0.95
HDAC1-201ENST00000373548 DCAF12L1Q5VU92 463 aa21■□□□□ 0.95
HDAC1-201ENST00000373548 ZNF677Q86XU0 584 aa21■□□□□ 0.95
HDAC1-201ENST00000373548 THNSL1Q8IYQ7 743 aa21■□□□□ 0.95
HDAC1-201ENST00000373548 ABHD16BQ9H3Z7 469 aa21■□□□□ 0.95
HDAC1-201ENST00000373548 H3BRB1 525 aa20.99■□□□□ 0.95
HDAC1-201ENST00000373548 UNGP13051 313 aaPredicted RBP20.99■□□□□ 0.95
HDAC1-201ENST00000373548 TBXAS1P24557 533 aaPredicted RBP20.99■□□□□ 0.95
HDAC1-201ENST00000373548 PHKA2P46019 1235 aa20.99■□□□□ 0.95
HDAC1-201ENST00000373548 POU5F1BQ06416 359 aa20.99■□□□□ 0.95
HDAC1-201ENST00000373548 ACVR2BQ13705 512 aa20.99■□□□□ 0.95
HDAC1-201ENST00000373548 SURF1Q15526 300 aa20.99■□□□□ 0.95
HDAC1-201ENST00000373548 CEP120Q8N960 986 aa20.99■□□□□ 0.95
HDAC1-201ENST00000373548 CDT1Q9H211 546 aa20.99■□□□□ 0.95
HDAC1-201ENST00000373548 TUT1Q9H6E5 874 aaKnown RBP20.99■□□□□ 0.95
HDAC1-201ENST00000373548 ZHX1Q9UKY1 873 aaPredicted RBP20.99■□□□□ 0.95
HDAC1-201ENST00000373548 CNTN6Q9UQ52 1028 aa20.99■□□□□ 0.95
HDAC1-201ENST00000373548 TNFSF13BQ9Y275 285 aa20.99■□□□□ 0.95
HDAC1-201ENST00000373548 PCDHB4Q9Y5E5 795 aa20.99■□□□□ 0.95
HDAC1-201ENST00000373548 KAT6AQ92794 2004 aa20.99■□□□□ 0.95
HDAC1-201ENST00000373548 SLC15A5A6NIM6 579 aa20.99■□□□□ 0.95
HDAC1-201ENST00000373548 ASS1P00966 412 aaKnown RBP20.99■□□□□ 0.95
HDAC1-201ENST00000373548 HOXC6P09630 235 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms