RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 HOXC10Q9NYD6 342 aa18.82■□□□□ 0.6
TRAF3IP1-201ENST00000373327 PIAS1O75925 651 aa18.81■□□□□ 0.6
TRAF3IP1-201ENST00000373327 ADCY2Q08462 1091 aa18.81■□□□□ 0.6
TRAF3IP1-201ENST00000373327 TMEM8AQ9HCN3 771 aa18.81■□□□□ 0.6
TRAF3IP1-201ENST00000373327 TXNDC16Q9P2K2 825 aa18.81■□□□□ 0.6
TRAF3IP1-201ENST00000373327 FRMPD4Q14CM0 1322 aa18.81■□□□□ 0.6
TRAF3IP1-201ENST00000373327 POLR2BP30876 1174 aaKnown RBP18.81■□□□□ 0.6
TRAF3IP1-201ENST00000373327 NOP14P78316 857 aaKnown RBP18.81■□□□□ 0.6
TRAF3IP1-201ENST00000373327 PPP2R5CQ13362 524 aa18.81■□□□□ 0.6
TRAF3IP1-201ENST00000373327 C4orf33Q8N1A6 199 aa18.81■□□□□ 0.6
TRAF3IP1-201ENST00000373327 TRIM7Q9C029 511 aa18.81■□□□□ 0.6
TRAF3IP1-201ENST00000373327 TCP11X1B4DZS4 312 aa18.81■□□□□ 0.6
TRAF3IP1-201ENST00000373327 SLC17A8Q8NDX2 589 aa18.81■□□□□ 0.6
TRAF3IP1-201ENST00000373327 MYCBPAPQ8TBZ2 947 aa18.81■□□□□ 0.6
TRAF3IP1-201ENST00000373327 KLHL29Q96CT2 875 aa18.81■□□□□ 0.6
TRAF3IP1-201ENST00000373327 DARS2Q6PI48 645 aaKnown RBP18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 ACTRT1Q8TDG2 376 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 PSPC1Q8WXF1 523 aaKnown RBP18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 PXMP2Q9NR77 195 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 FAM187AA6NFU0 413 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 GTF2H1P32780 548 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 ARSEP51690 589 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 ITGA8P53708 1063 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 PSMC1P62191 440 aaKnown RBP18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 IFI35P80217 286 aaPredicted RBP18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 P3H1Q32P28 736 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 CHMP6Q96FZ7 201 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 CALR3Q96L12 384 aaKnown RBP18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 SMC6Q96SB8 1091 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 ITGB4P16144 1822 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 AGPSO00116 658 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 MEFVO15553 781 aaPredicted RBP18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 SAT1P21673 171 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 R3HDM1Q15032 1099 aaKnown RBP18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 XKR3Q5GH77 459 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 ZNF667Q5HYK9 610 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 TMEM35BQ8NCS4 154 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 LRRC8CQ8TDW0 803 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 LENG9Q96B70 501 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 C10orf88Q9H8K7 445 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 CYP26B1Q9NR63 512 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 RIPK3Q9Y572 518 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 RGL2O15211 777 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 SUN1O94901 812 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 SHBGP04278 402 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 FECHP22830 423 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 COILP38432 576 aaPredicted RBP18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 RGS7P49802 495 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 DHX34Q14147 1143 aaKnown RBP18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 DLK2Q6UY11 383 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 C1orf131Q8NDD1 294 aaKnown RBP18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 HVCN1Q96D96 273 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 MIS12Q9H081 205 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 RPF1Q9H9Y2 349 aaKnown RBP18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 ERVK-5Q9HDB9 667 aa18.8■□□□□ 0.6
TRAF3IP1-201ENST00000373327 ZNF844Q08AG5 666 aa18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 TRAPPC12Q8WVT3 735 aa18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 DDX23Q9BUQ8 820 aaKnown RBP18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 NEUROG2Q9H2A3 272 aa18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 MYH15Q9Y2K3 1946 aa18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 RHOT1Q8IXI2 618 aa18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 TRIM11Q96F44 468 aa18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 CFAP36Q96G28 342 aa18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 SPATA33Q96N06 139 aa18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 HAUS2Q9NVX0 235 aa18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 KCND2Q9NZV8 630 aa18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 DCTN4Q9UJW0 460 aa18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 PDIA2Q13087 525 aaKnown RBP18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 SLFN12LQ6IEE8 588 aa18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 CROCCP2Q86T23 111 aa18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 PYROXD1Q8WU10 500 aa18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 RAPGEF5Q92565 580 aa18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 OSBPL8Q9BZF1 889 aa18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 MTMR12Q9C0I1 747 aa18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 PFASO15067 1338 aa18.79■□□□□ 0.6
TRAF3IP1-201ENST00000373327 UBE4BO95155 1302 aa18.78■□□□□ 0.6
TRAF3IP1-201ENST00000373327 RPL21P46778 160 aaKnown RBP18.78■□□□□ 0.6
TRAF3IP1-201ENST00000373327 NLRP11P59045 1033 aaKnown RBP18.78■□□□□ 0.6
TRAF3IP1-201ENST00000373327 ADPGKQ9BRR6 497 aa18.78■□□□□ 0.6
TRAF3IP1-201ENST00000373327 FGFR1OP2Q9NVK5 253 aa18.78■□□□□ 0.6
TRAF3IP1-201ENST00000373327 FOXO6A8MYZ6 492 aa18.78■□□□□ 0.6
TRAF3IP1-201ENST00000373327 AARSP49588 968 aaKnown RBP eCLIP18.78■□□□□ 0.6
TRAF3IP1-201ENST00000373327 TRIM68Q6AZZ1 485 aa18.78■□□□□ 0.6
TRAF3IP1-201ENST00000373327 DPP9Q86TI2 863 aa18.78■□□□□ 0.6
TRAF3IP1-201ENST00000373327 RNF34Q969K3 372 aa18.78■□□□□ 0.6
TRAF3IP1-201ENST00000373327 CNOT10Q9H9A5 744 aaKnown RBP18.78■□□□□ 0.6
TRAF3IP1-201ENST00000373327 GDF3Q9NR23 364 aa18.78■□□□□ 0.6
TRAF3IP1-201ENST00000373327 STRCP1A6NGW2 1772 aa18.78■□□□□ 0.6
TRAF3IP1-201ENST00000373327 CDR2Q01850 454 aa18.78■□□□□ 0.6
TRAF3IP1-201ENST00000373327 CAVIN3Q969G5 261 aa18.78■□□□□ 0.6
TRAF3IP1-201ENST00000373327 IGLV3-22A0A075B6J6 115 aa18.77■□□□□ 0.6
TRAF3IP1-201ENST00000373327 EGFRP00533 1210 aa18.77■□□□□ 0.6
TRAF3IP1-201ENST00000373327 RARAP10276 462 aa18.77■□□□□ 0.6
TRAF3IP1-201ENST00000373327 FYB2Q5VWT5 728 aa18.77■□□□□ 0.6
TRAF3IP1-201ENST00000373327 NME8Q8N427 588 aa18.77■□□□□ 0.6
TRAF3IP1-201ENST00000373327 PARD3BQ8TEW8 1205 aa18.77■□□□□ 0.6
TRAF3IP1-201ENST00000373327 SEC16BQ96JE7 1060 aa18.77■□□□□ 0.6
TRAF3IP1-201ENST00000373327 RBM15Q96T37 977 aaKnown RBP eCLIP18.77■□□□□ 0.6
TRAF3IP1-201ENST00000373327 TMBIM4Q9HC24 238 aa18.77■□□□□ 0.6
TRAF3IP1-201ENST00000373327 DIS3Q9Y2L1 958 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms