RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 UNC5CLQ8IV45 518 aa9.71□□□□□ -0.86
PTPRT-205ENST00000373193 XPO6Q96QU8 1125 aaKnown RBP9.71□□□□□ -0.86
PTPRT-205ENST00000373193 AMNQ9BXJ7 453 aa9.71□□□□□ -0.86
PTPRT-205ENST00000373193 TLR7Q9NYK1 1049 aaKnown RBP9.71□□□□□ -0.86
PTPRT-205ENST00000373193 NPATQ14207 1427 aa9.71□□□□□ -0.86
PTPRT-205ENST00000373193 TOP2BQ02880 1626 aa9.71□□□□□ -0.86
PTPRT-205ENST00000373193 CYP19A1P11511 503 aaPredicted RBP9.71□□□□□ -0.86
PTPRT-205ENST00000373193 SARSP49591 514 aaKnown RBP9.71□□□□□ -0.86
PTPRT-205ENST00000373193 CDH6P55285 790 aa9.71□□□□□ -0.86
PTPRT-205ENST00000373193 ARMCX2Q7L311 632 aa9.71□□□□□ -0.86
PTPRT-205ENST00000373193 BBS7Q8IWZ6 715 aa9.71□□□□□ -0.86
PTPRT-205ENST00000373193 SPON2Q9BUD6 331 aa9.71□□□□□ -0.86
PTPRT-205ENST00000373193 CFAP99D6REC4 459 aa9.71□□□□□ -0.86
PTPRT-205ENST00000373193 NDUFA5Q16718 116 aa9.71□□□□□ -0.86
PTPRT-205ENST00000373193 MIEF2Q96C03 454 aa9.71□□□□□ -0.86
PTPRT-205ENST00000373193 SRPK1Q96SB4 655 aaKnown RBP9.71□□□□□ -0.86
PTPRT-205ENST00000373193 SIK2Q9H0K1 926 aa9.71□□□□□ -0.86
PTPRT-205ENST00000373193 FAM47DPA6NHR8 397 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 PSMA4P25789 261 aaKnown RBP9.7□□□□□ -0.86
PTPRT-205ENST00000373193 CIITAP33076 1130 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 RMDN1Q96DB5 314 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 PIF1Q9H611 641 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 MBD2Q9UBB5 411 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 HNRNPRO43390 633 aaKnown RBP9.7□□□□□ -0.86
PTPRT-205ENST00000373193 ALOX12P18054 663 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 THNSL1Q8IYQ7 743 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 CMTM5Q96DZ9 223 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 AS3MTQ9HBK9 375 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 ZNF23P17027 643 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 ZSCAN20P17040 1043 aaPredicted RBP9.7□□□□□ -0.86
PTPRT-205ENST00000373193 BCL2L14Q9BZR8 327 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 STK39Q9UEW8 545 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 XPO7Q9UIA9 1087 aaKnown RBP9.7□□□□□ -0.86
PTPRT-205ENST00000373193 DHX40Q8IX18 779 aaKnown RBP9.7□□□□□ -0.86
PTPRT-205ENST00000373193 TASP1Q9H6P5 420 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 FAM107AO95990 144 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 PRCPP42785 496 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 RFX3P48380 749 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 GSSP48637 474 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 TAF8Q7Z7C8 310 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 STKLD1Q8NE28 680 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 GJB4Q9NTQ9 266 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 TARSL2A2RTX5 802 aaKnown RBP9.7□□□□□ -0.86
PTPRT-205ENST00000373193 TEX33O43247 280 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 PSMC3P17980 439 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 HOXC9P31274 260 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 EIF3EP60228 445 aaKnown RBP9.7□□□□□ -0.86
PTPRT-205ENST00000373193 ITGB3BPQ13352 177 aaPredicted RBP9.7□□□□□ -0.86
PTPRT-205ENST00000373193 C12orf60Q5U649 245 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 CLEC4MQ9H2X3 399 aaPredicted RBP9.7□□□□□ -0.86
PTPRT-205ENST00000373193 ZC3H7BQ9UGR2 993 aaKnown RBP9.7□□□□□ -0.86
PTPRT-205ENST00000373193 ZFYVE9O95405 1425 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 ZNF839A8K0R7 811 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 MIF4GDA9UHW6 222 aaKnown RBP9.7□□□□□ -0.86
PTPRT-205ENST00000373193 AP1G2O75843 785 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 BCAR1P56945 870 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 CORO7P57737 925 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 PSMC5P62195 406 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 OVGP1Q12889 678 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 PTK7Q13308 1070 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 USP17L2Q6R6M4 530 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 OLFM1Q99784 485 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 BHMT2Q9H2M3 363 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 CHKBQ9Y259 395 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 MTO1Q9Y2Z2 717 aaKnown RBP9.7□□□□□ -0.86
PTPRT-205ENST00000373193 PSTPIP1O43586 416 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 POU1F1P28069 291 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 DRAP1Q14919 205 aaPredicted RBP9.7□□□□□ -0.86
PTPRT-205ENST00000373193 ZNF667Q5HYK9 610 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 FAM102AQ5T9C2 384 aaPredicted RBP9.7□□□□□ -0.86
PTPRT-205ENST00000373193 BTN3A3O00478 584 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 RESTQ13127 1097 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 NUMA1Q14980 2115 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 TTC13Q8NBP0 860 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 C1orf232A0A0U1RR37 186 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 TMEM120BA0PK00 339 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 STK25O00506 426 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 MTRF1O75570 445 aaKnown RBP9.7□□□□□ -0.86
PTPRT-205ENST00000373193 NPM3O75607 178 aaKnown RBP9.7□□□□□ -0.86
PTPRT-205ENST00000373193 INAQ16352 499 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 KYNUQ16719 465 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 PARP10Q53GL7 1025 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 DENND6AQ8IWF6 608 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 CD274Q9NZQ7 290 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 BFARQ9NZS9 450 aa9.7□□□□□ -0.86
PTPRT-205ENST00000373193 YWHABP31946 246 aaKnown RBP9.69□□□□□ -0.86
PTPRT-205ENST00000373193 CYB5D1Q6P9G0 228 aa9.69□□□□□ -0.86
PTPRT-205ENST00000373193 APRTP07741 180 aa9.69□□□□□ -0.86
PTPRT-205ENST00000373193 TFE3P19532 575 aaPredicted RBP9.69□□□□□ -0.86
PTPRT-205ENST00000373193 DYNLL1P63167 89 aaKnown RBP9.69□□□□□ -0.86
PTPRT-205ENST00000373193 SYTL3Q4VX76 610 aa9.69□□□□□ -0.86
PTPRT-205ENST00000373193 FAM45BPQ6NSW5 357 aa9.69□□□□□ -0.86
PTPRT-205ENST00000373193 TSHZ1Q6ZSZ6 1077 aa9.69□□□□□ -0.86
PTPRT-205ENST00000373193 USP33Q8TEY7 942 aa9.69□□□□□ -0.86
PTPRT-205ENST00000373193 TBC1D22AQ8WUA7 517 aa9.69□□□□□ -0.86
PTPRT-205ENST00000373193 ZNF668Q96K58 619 aaPredicted RBP9.69□□□□□ -0.86
PTPRT-205ENST00000373193 HAO1Q9UJM8 370 aa9.69□□□□□ -0.86
PTPRT-205ENST00000373193 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.69□□□□□ -0.86
PTPRT-205ENST00000373193 ZNF618Q5T7W0 954 aa9.69□□□□□ -0.86
PTPRT-205ENST00000373193 LRRC71Q8N4P6 559 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms