RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 DDX53Q86TM3 631 aaKnown RBP12.14□□□□□ -0.47
VCL-202ENST00000372755 PRUNE1Q86TP1 453 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 ZNF556Q9HAH1 456 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 ADGRL3Q9HAR2 1447 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 GSNP06396 782 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 ALDH18A1P54886 795 aaKnown RBP12.14□□□□□ -0.47
VCL-202ENST00000372755 STAG2Q8N3U4 1231 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 PPP2R3CQ969Q6 453 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 ADNPQ9H2P0 1102 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 JPH1Q9HDC5 661 aaPredicted RBP12.14□□□□□ -0.47
VCL-202ENST00000372755 TMEM161AQ9NX61 479 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 ARL2BPQ9Y2Y0 163 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 ERVK-7P63135 1459 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 ORC4O43929 436 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 ATP2C1P98194 919 aaPredicted RBP12.14□□□□□ -0.47
VCL-202ENST00000372755 ATPAF2Q8N5M1 289 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 GJB4Q9NTQ9 266 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 ARHGEF38Q9NXL2 777 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 COL15A1P39059 1388 aa12.14□□□□□ -0.47
VCL-202ENST00000372755 WDR47O94967 919 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 PDIA5Q14554 519 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 PLEKHM3Q6ZWE6 761 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 CYFIP1Q7L576 1253 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 ATXN7L3BQ96GX2 97 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 SENP7Q9BQF6 1050 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 MRPL1Q9BYD6 325 aaKnown RBP12.13□□□□□ -0.47
VCL-202ENST00000372755 MRFAP1Q9Y605 127 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 A0A1B0GW55 424 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 CYP26A1O43174 497 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 TDP2O95551 362 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 DUX4L2P0CJ85 424 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 DUX4L3P0CJ86 424 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 DUX4L4P0CJ87 422 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 DUX4L5P0CJ88 424 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 DUX4L6P0CJ89 424 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 DUX4L7P0CJ90 424 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 SESN2P58004 480 aaPredicted RBP12.13□□□□□ -0.47
VCL-202ENST00000372755 C16orf89Q6UX73 402 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 CLMNQ96JQ2 1002 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 DDX28Q9NUL7 540 aaKnown RBP12.13□□□□□ -0.47
VCL-202ENST00000372755 PSD3Q9NYI0 1048 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 DUX4Q9UBX2 424 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 ZNF229Q9UJW7 825 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 GOLGA8TH3BQL2 631 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 TBC1D4O60343 1298 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 SRP72O76094 671 aaKnown RBP12.13□□□□□ -0.47
VCL-202ENST00000372755 ARL4DP49703 201 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 STAT5BP51692 787 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 ADCK1Q86TW2 530 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 ANKMY2Q8IV38 441 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 TEX9Q8N6V9 391 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 RNF149Q8NC42 400 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 AGR3Q8TD06 166 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 CMTM5Q96DZ9 223 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 OTUD5Q96G74 571 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 BLOC1S6Q9UL45 172 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 PIN4Q9Y237 131 aaKnown RBP12.13□□□□□ -0.47
VCL-202ENST00000372755 ADGBQ8N7X0 1667 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 PITPNM2Q9BZ72 1349 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 CCDC78A2IDD5 438 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 RASSF10A6NK89 507 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 FAM107AO95990 144 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 FGFR4P22455 802 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 BYSLQ13895 437 aaKnown RBP12.13□□□□□ -0.47
VCL-202ENST00000372755 RABGAP1LQ5R372 815 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 LRIG3Q6UXM1 1119 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 OR6J1Q8NGC5 347 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 ELMO2Q96JJ3 720 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 FAM167BQ9BTA0 163 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 HDAC6Q9UBN7 1215 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 CPDO75976 1380 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 PHF2O75151 1096 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 SERPINI2O75830 405 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 SPDYAQ5MJ70 313 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 SIRT2Q8IXJ6 389 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 SLC44A5Q8NCS7 719 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 ALDH8A1Q9H2A2 487 aaPredicted RBP12.13□□□□□ -0.47
VCL-202ENST00000372755 RANBP17Q9H2T7 1088 aaKnown RBP12.13□□□□□ -0.47
VCL-202ENST00000372755 RPAP3Q9H6T3 665 aaPredicted RBP12.13□□□□□ -0.47
VCL-202ENST00000372755 POLD4Q9HCU8 107 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 ATP11BQ9Y2G3 1177 aa12.13□□□□□ -0.47
VCL-202ENST00000372755 FAM196BA6NMK8 535 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 EIF3DO15371 548 aaKnown RBP eCLIP12.12□□□□□ -0.47
VCL-202ENST00000372755 TKFCQ3LXA3 575 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 NEDD1Q8NHV4 660 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 KDM5CP41229 1560 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 NDUFS3O75489 264 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 ATP1A1P05023 1023 aaKnown RBP12.12□□□□□ -0.47
VCL-202ENST00000372755 ITIH2P19823 946 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 MTFR1Q15390 333 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 ICE2Q659A1 982 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 ARHGEF26Q96DR7 871 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 ZNF668Q96K58 619 aaPredicted RBP12.12□□□□□ -0.47
VCL-202ENST00000372755 SLC30A1Q9Y6M5 507 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 AKT1P31749 480 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 STX3Q13277 289 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 CNGA3Q16281 694 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 LDHDQ86WU2 507 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 CALML6Q8TD86 181 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 PTPRN2Q92932 1015 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms